KEGG   Nissabacter sp. SGAir0207: C1N62_21270
Entry
C1N62_21270       CDS       T09781                                 
Symbol
traD
Name
(GenBank) conjugative coupling factor TraD, PFGI-1 class
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
nig  Nissabacter sp. SGAir0207
Brite
KEGG Orthology (KO) [BR:nig00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nig02044]
    C1N62_21270 (traD)
Secretion system [BR:nig02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   C1N62_21270 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87 AAA_22
Other DBs
NCBI-ProteinID: QCR38672
LinkDB
Position
pSGAir0207_3:96951..99050
AA seq 699 aa
MSDKYVIEALLRPAVELNTAVAAGTAAIVCVTAPWAVALAPSVSYVTAGGFAVLSAIRAR
QGMQVIRYRRNLRRLPRYVMTSKQIPVSKRRLFLGRGFRWTQKHTQRLRDTLRPEVAHYL
KPSRLYQLARQLEEATENSLPAIGRLLSADTPVNPVRPLPPVGGNPAVHGIEPDETDVTL
DLRERVGHTVVYGTTRVGKTRLAELLITQDIRRGDVTIVFDPKGDADLLKRVWAEAHRAG
RGDELTVFHLGWPDISARYNAVGRFGRVSEVATRVAGQLSGEGNSAAFREFAWRFVNIVA
RALVALGERPDYTLITRYVNNIADLYLRYAEKIITEKLPELRGQIENNANAFSEDDVPRN
MQGQPEAIRIWAVEVALSSDAGNALYDPILDGLRSAVRYDRTYFDKIVASLLPLLEKLTT
GKTAELLSPDYLNMEDPRPIFDWEQVIRKKGIVYVGLDALSDSEVASAVGNSMFADLVSV
AGHIYKHGINGGLPGSKEGKDPINLHCDEFNELMGNEFIPLINKGGGAGMQVTAYTQTSS
DIEARIGSAAKTSQVQGNFNNLIMLRVRENRTAELLTSQLPQVEIYSKTLVSGHQDSADV
TVNHDFTSSTQDRVGTIKVPLLEPADIVTLPKGQAFALLEGGQLWKIRMPLPAGDAGDVH
MPENIARLAEEMRRNYHSSEGWWDSRSSAAAPVKGGNNG
NT seq 2100 nt   +upstreamnt  +downstreamnt
gtgagtgataaatacgtaattgaagcccttctgcgcccggctgtggagctgaatactgcg
gtcgcagcgggcactgccgccatcgtctgcgtgacagcgccctgggcagtagccctggca
ccctccgtcagctacgttaccgccggcggattcgccgtgctttctgccatacgcgcgcgt
cagggaatgcaggtcattcgctatcgccgcaaccttcgccgtttaccgcgctatgtgatg
acgtcaaaacagatccccgtcagtaaacgccggctttttctgggccgtgggtttcgctgg
acccagaaacacacccagcgcctgcgcgatacgctgcgcccggaagtggcccactacctg
aagccgtcgaggctgtatcagcttgcccgccagttagaggaagcgacggaaaacagttta
ccggcgatcggcaggctgctcagtgccgatacgcccgtcaatccggttcgcccgcttccc
ccggttggcggaaatccagccgtacacggcattgaaccggatgaaactgacgtcacgctc
gatctacgtgagcgtgtcggccacacggttgtttacggtacaacccgcgtgggcaaaacc
cgcctcgctgagctgttaatcactcaggatatacgccgtggagacgtcaccattgtgttt
gatccgaaaggcgatgcggacctgctgaaaagggtctgggcggaagcccaccgggcaggc
cggggcgatgagctgaccgttttccatcttggctggcctgatatttccgcgcggtataac
gccgtagggcgctttgggcgcgtatcggaagtcgcaacccgcgttgccggccagctcagc
ggtgaaggtaacagcgcagcgtttcgtgagtttgcctggcggttcgtgaatatcgttgcg
cgtgcgctggttgctctcggggaacgcccggattacacgctcatcacccgctacgtgaac
aacatcgccgatctgtatctgcgttatgccgaaaaaattattaccgagaagctgcccgaa
ctgcgcggtcagatcgagaataacgccaacgcattcagtgaagacgacgtgccgcgcaac
atgcaggggcagcctgaagctatccgtatctgggccgttgaagtggcgctgagttctgac
gcaggaaacgcgctgtatgacccgatacttgacggactgcgctctgccgtacgctatgac
cgcacctactttgacaaaatcgtggcgtcactgctgccgctgctggaaaaactgaccacc
ggtaaaacggcggagctgctgtctcccgattatctgaatatggaagatccgcgccctatt
tttgactgggagcaggttatccgtaaaaaaggcatcgtttacgtggggcttgatgcgctc
agcgacagcgaggttgccagcgccgtaggtaacagcatgtttgccgatctggtgagcgtg
gccggtcacatctacaagcacggtatcaacggcggcctgccgggttcaaaagagggcaaa
gaccctattaacctgcactgcgatgaattcaacgaactgatgggaaatgagtttatccca
cttatcaataaaggcggcggggcaggcatgcaggtgacggcctacacgcagacctcatct
gatattgaagcccgtatcgggagcgcggcaaaaacctctcaggttcagggtaactttaac
aacctgatcatgctgcgcgtgcgagaaaaccggacggcagagctgctgacctcacagctg
ccgcaggttgaaatctacagcaaaacgctggtctcaggtcatcaggattcagctgacgtc
accgtcaatcacgattttacctccagcactcaggatcgcgtcggcaccattaaagtgcca
ctgcttgagcctgccgacattgtcacactgcctaaaggtcaggcgtttgcgttgcttgag
ggcggccagctctggaaaattcgtatgccgctgccagcgggcgatgcaggtgacgtgcat
atgcctgagaacatcgcgcgtcttgcagaagagatgcgccggaattaccacagcagtgaa
gggtggtgggacagccgcagttcagcagcagcgccagtgaagggaggtaacaatggctga

DBGET integrated database retrieval system