Nitratiruptor sp. YY08-10: NitYY0810_C0056 Help Entry NitYY0810_C0056   CDS       T10768                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism nih  Nitratiruptor sp. YY08-10 Pathway nih03018   RNA degradation Brite KEGG Orthology (KO) [BR:nih00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     NitYY0810_C0056  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nih03019]     NitYY0810_C0056 Messenger RNA biogenesis [BR:nih03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      NitYY0810_C0056 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6 Motif Other DBs NCBI-ProteinID:  BCD59326 LinkDB All DBs Position 51930..53753 Genome browser AA seq 607 aa AA seqDB search MEQQPRNNQQNGNQQRNQQRRNQNYNQGVYKDIKKALAANERMQQSRLTPRVNTKSNAKV KITPLGGLGEIGGNITVFETEKSAIVIDVGMSFPTEDMHGVDILVPDFSYLRQIKNKIKG IVITHAHEDHIGAVPYLFKEMQFPIYGTPLPLGMIGNKFDEHGMSKYKSYFRYIEKRKPI KIGDFEVEWMHMTHSIIDASSLAITTEAGTIIHTGDFKIDHTPIDGYPADLHRLAYYGER GVLLLLSDSTNSHNPGITKSEASVGPTFDLLFSRAKGRVLMSTFSSNIHRVYQAIEHGIK YGRKVCIIGRSMERNLEITMELGYVKLPQNIFIEPHELGKYRDDEILIVTTGSQGESMSA LYRMATNEHRHVKIKPSDTIILSAKAIPGNERSVSSLINFIQKCGATVAYQDFSEIHVSG HAAQEEQKLMLRLVKPKFFLPVHGEYNHLMKHKETAVKCGIPERNIYLMSDGDQIEVSPK YMKKVGTVKTGKAYIDNQLNEEIESDVVIDRQKMATEGIVIIVAQIAKDTKKFITPPKVS SFGLVADKKDKEFEKEISTLLEQFLMNKPELVEAPKKLENDFRQVVRKHIFRKYKKYPTI VPTLFIM NT seq 1824 nt NT seq  +upstreamnt  +downstreamnt atggagcaacaacccagaaacaaccaacaaaacggtaatcaacaacgaaatcaacagcgt agaaatcaaaactacaaccagggtgtctacaaagacataaaaaaagccctggctgccaat gaacggatgcagcaaagtcgtttgactcctagggtaaatacaaaaagtaatgccaaagtg aaaatcactcctttggggggacttggagaaattggaggaaatatcaccgtctttgagacg gaaaaaagcgctattgtaattgatgttggaatgagctttccaacagaagatatgcatggt gtggatattttggtaccggacttctcctatcttcgacagattaaaaacaaaatcaaaggg attgtcatcactcatgcccatgaggaccatatcggtgcagtaccctatctttttaaagag atgcagtttccaatttacggtactccccttccccttggaatgattggaaataaatttgat gaacatggtatgagtaaatataaaagctattttcgctatatcgaaaaaagaaagccgatc aagattggagattttgaagtagagtggatgcatatgacccattccatcatcgatgcaagc tctttggcaataacgacggaagcggggactatcatccatacgggagatttcaaaatagat catacaccgatagacggatatccggcagatttgcatagacttgcatactatggagaacga ggcgtattattgcttctgtctgattctaccaattcacacaatcccgggattacaaaatcg gaagcgagtgtcggtccgacatttgatctgctcttttccagggccaaaggccgtgttttg atgagtaccttctcctccaacatccacagagtctatcaagccattgagcacggcatcaaa tatggaagaaaagtctgtattatcggacggtctatggagcgaaatttagagatcactatg gagcttggctatgtgaaattgccccaaaatatcttcatcgagccgcatgaacttggcaaa tatagagatgatgagattttgatcgtaacgacaggaagccagggcgagtcgatgagtgcg ttatatagaatggcgacaaacgagcatcgtcatgtgaaaatcaaaccaagcgatacgatt attctctcggccaaagcgattccggggaatgaacgaagtgtttcaagccttatcaacttt atccaaaaatgtggtgcaacggtggcgtatcaagattttagcgagattcatgtctcagga cacgcggcccaggaggagcaaaaattgatgctgcgtcttgtgaagccaaaatttttcttg ccggtgcatggagagtataatcatttgatgaagcataaagagacggctgtcaaatgtgga attccagaacgcaatatctacctcatgagtgacggagatcagattgaggtgagcccaaaa tatatgaaaaaagtaggaaccgtcaaaacaggaaaagcctatatcgataatcagctcaat gaagagattgaaagcgatgtggtgatcgataggcaaaaaatggcaacagaagggattgtg atcattgtggcgcaaatcgcaaaagatacgaaaaaattcatcacgccaccaaaagtctcc agttttggacttgttgcagataaaaaagataaagagttcgaaaaagagatcagtacgctc cttgagcagtttttgatgaataaaccggaacttgtcgaggctccgaagaagttggagaac gattttcgacaggttgttcgaaagcatatttttagaaaatacaaaaaatatccgacaatc gttccaactctttttatcatgtga

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