Nitratiruptor sp. YY08-10: NitYY0810_C1553
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Entry
NitYY0810_C1553 CDS
T10768
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nih Nitratiruptor sp. YY08-10
Pathway
nih03420
Nucleotide excision repair
nih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NitYY0810_C1553
03430 Mismatch repair
NitYY0810_C1553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nih03400
]
NitYY0810_C1553
Enzymes [BR:
nih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NitYY0810_C1553
DNA repair and recombination proteins [BR:
nih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NitYY0810_C1553
MMR (mismatch excision repair)
Other MMR factors
NitYY0810_C1553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
CarD_TRCF_RID
DUF4252
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BCD60775
UniProt:
A0A7R6V812
LinkDB
All DBs
Position
1450550..1452595
Genome browser
AA seq
681 aa
AA seq
DB search
MEKILKHLNDAQREAAQTVDGPILILAGAGSGKTKTITTRLAYLISLGVDPASILTLTFT
NKAAKEMRERALSMLDDPLYPPLLCTFHKFGLLFLKLHIDKLGRDNNFVIIDTDDKKRII
KSFKPDLPVSLVASEISKYKNSLITPEEAIASARLPNFKKISNFYKRYQEYLLENNLVDF
DDLLVLTYTILEQDEELCKTISNKYQFIMIDEYQDTNELQNRLVQKLCSQHNNICVVGDD
DQSIYGWRGANVKNILEFPNQFDNVKIIKLENNYRSTKKILEAANSLIQHNRNRLGKKLV
STMEDGNDIEILALHDEQEEAMEVGKRVQKLIDAGVRPSEIAVLFRINALSRSIEEAFNK
LKINFKLVGAIRFYERAEVKDIISYLRIITNPCDEFSLKRIINRPKRGIGKATYEKLLQK
ANEKHECILEMLMHSSEEDLTQIIGKKSAKTILTFVHNIKYLKELSQESLYNFLEEFDRT
LGIKEYYRALPDGFERVANIDEFYGMFRDYIKQNPQNSLDDFINDISLQSDQDQIGGEAV
SIMSVHASKGLEFEHLFVIGMEEGFFPLTGDGCDIEEERRLGYVAITRAKKGLVLSHVKS
RFYKGRRAYLEKSRFLGEAGLCKSSVKIEKSVGFKKGDLVKHKIFGIGRVIGVSKAGREF
KLTINFSGQQRDILSSFVERA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaattttgaaacatctcaatgatgcacaaagagaagctgctcaaacggtagac
ggccccatactgattcttgccggagcgggaagcggaaaaacaaaaactatcacaactaga
ctcgcttatctgatcagcctcggtgtcgatcctgcttccattctcacactcacctttacc
aataaagcggcaaaagagatgcgagaacgggctctttctatgttagatgaccctctctat
ccacctcttttatgtacatttcacaaatttggtctgctctttttaaagcttcatatcgat
aaactgggacgtgacaacaacttcgtgatcattgatacggatgataaaaaaagaattatt
aaatcattcaaaccggaccttcccgtctctttggttgcaagtgagatctcaaaatacaaa
aactctcttatcactcctgaagaagcgatagcaagtgcaagacttccaaactttaaaaaa
atttccaatttttacaaaagatatcaagaatatttactggaaaacaatcttgtagatttc
gatgatcttttggtgctaacctataccattttggagcaggatgaagagctgtgcaaaaca
atcagcaacaaatatcagtttattatgattgatgaatatcaagatacaaatgagctgcaa
aacagactggtgcaaaaactttgcagccaacataacaatatctgcgtcgtgggagatgac
gaccaaagcatctatggatggcggggcgcaaatgtcaaaaacattttggagttcccaaac
caatttgacaatgtcaaaatcatcaaactggaaaacaattatcggtccaccaaaaagata
cttgaggcagccaacagtttaatccagcacaacagaaacagactcggcaaaaaacttgtc
tcaaccatggaggatggtaacgatatcgaaatattggctttgcatgatgagcaagaagag
gcgatggaagtgggcaaaagagtgcaaaagctcatcgatgcgggtgtaagaccaagtgaa
attgccgttcttttccgcattaatgcactctcacgttctatcgaagaggctttcaataaa
ctcaaaatcaacttcaaacttgttggagcaatccgcttctatgagcgtgcagaagtaaaa
gatatcattagctaccttcgcatcattaccaatccgtgcgacgagttttccctcaaacgc
attatcaatagacccaaacggggtatcggaaaagcaacctatgagaagcttttacaaaaa
gcgaatgaaaagcatgaatgtatcttagagatgcttatgcattcaagtgaggaagatctg
acccaaatcatcgggaaaaagagtgcaaaaaccatcctcacattcgttcacaatatcaaa
tatctcaaagaactcagccaagagagtctatacaattttttggaagagtttgatagaacc
cttggtatcaaagagtactatcgagcactgcctgacggctttgaaagggtggcaaatatt
gacgagttttacggaatgtttcgagactacatcaaacaaaatcctcaaaattctcttgat
gatttcatcaatgatatctctttacaatcagaccaggaccaaattggcggcgaagcagtc
tccattatgagcgtccatgcaagcaaagggcttgaattcgaacatctgtttgtcatcggg
atggaagagggatttttccctttgaccggtgatgggtgcgatatcgaagaggagcgcaga
cttggctacgtagcaatcacgagggctaaaaaaggtcttgtcctctcccacgtaaaaagc
agattttacaaaggacgaagggcgtatctggaaaagagcagatttttgggcgaagccggt
ctatgcaaatcgagcgtaaaaatagaaaaaagtgtcggatttaaaaaaggcgatcttgtc
aaacataaaatttttggtataggacgtgtcatcggagtcagcaaagcaggacgagaattt
aaactaacaatcaacttttcgggccaacagcgtgatattttaagctcttttgtggagcgg
gcatga
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