Nitrosomonas sp. Is79A3: Nit79A3_0341
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Entry
Nit79A3_0341 CDS
T01569
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nii
Nitrosomonas sp. Is79A3
Pathway
nii03030
DNA replication
nii03430
Mismatch repair
nii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nit79A3_0341
03430 Mismatch repair
Nit79A3_0341
03440 Homologous recombination
Nit79A3_0341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nii03032
]
Nit79A3_0341
03400 DNA repair and recombination proteins [BR:
nii03400
]
Nit79A3_0341
Enzymes [BR:
nii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nit79A3_0341
DNA replication proteins [BR:
nii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Nit79A3_0341
DNA repair and recombination proteins [BR:
nii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Nit79A3_0341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AEJ00229
LinkDB
All DBs
Position
372580..373971
Genome browser
AA seq
463 aa
AA seq
DB search
MSTLLPCYVLLDLETTGATPTQDRITEIGLIRYENGIEVGRWTTLINPEVSISPFIQRLT
GITQSMVKNAPTFFEIRNILLDWVDDAVLCAHNVRFDYGFLKNEFKRIGITFQKKLLCTV
KLSRKLYPQHKGHGLDAIIERFKLVCENRHRAMGDTEMMAAFIAAAFNELGEYSVQEVAL
ALLKQQAIPANLDQLEINAIPDTFGVYLFHGESALLYVGKSVTLRTRVLSHFQGDHSSAK
EMRIAQEIKRIEYRVTSGELGALLLESRLIKEYQPIHNRQLRRERQLCAWQISDDPAARP
LVTLIYESDIDWTTLNNVYGTFKTKRQALEILNKLADEHELCDKALGLEKGPGVCFAHQL
KHCKGLCADKESAESHRLRLLIALSGYKLLAWPFDGRIGIREHNPDNDMTEVHVFDQWCH
LGTVRDHQEFDEIATHPHFDRDTYRYLLKFLNRKDVEVITLHG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgttgttgccgtgttatgtattgctggatctggaaacaacgggtgctacccca
actcaagatcgtatcactgagataggcttaatccgttatgagaacggtattgaagtcggc
cgttggactacgctcatcaatccagaagtcagtatctcaccattcattcagcgattgacc
ggcataacccaaagcatggtaaaaaatgcgccgactttctttgaaattcgcaacatcctg
ctagattgggtcgatgatgccgttttgtgtgctcacaatgtacgtttcgattatggtttc
ctcaaaaacgaattcaagcgcattggcattacattccagaaaaaactcttgtgcacggtc
aaactttcaagaaagctatacccgcaacataaaggacatggcttagatgccattatagaa
agattcaaactggtttgtgagaaccgccaccgggccatgggtgatacagaaatgatggca
gcgtttattgctgcggccttcaatgaattaggggaatattctgttcaggaagttgctctg
gcattactgaaacagcaagccattccggctaatctcgatcaacttgaaatcaatgccata
ccggacacctttggtgtttatttattccatggtgaaagtgcactgctgtatgtcggtaaa
agtgttactttgagaacgcgtgtgctcagtcactttcagggtgatcatagctcagccaag
gaaatgcgcattgcccaagaaatcaagcgaatcgagtaccgggtcaccagtggagagctt
ggagccttgctattagaatcgcgcttgattaaagaatatcagcctatccacaatcggcag
ctcagacgtgagagacaattatgcgcatggcagatttctgatgatcctgcggcccggcca
ttggttaccttgatttatgaaagtgatatcgactggactaccttaaataatgtttatggc
actttcaaaaccaaacgacaagcactggagattctaaataagcttgccgatgaacatgag
ttatgtgataaggcattagggctggaaaaaggccctggcgtgtgttttgcgcatcaatta
aagcactgtaaaggattatgcgcggacaaagaatctgcggaatctcatcgcttacgcctt
ttgatagctttaagtggttacaagcttttagcgtggccatttgatggtcgcatcgggatt
agagagcataatccggataatgacatgacagaagtgcatgtctttgaccaatggtgtcat
cttggcacagttagagatcatcaggagtttgatgaaatagcgactcatcctcattttgac
cgtgatacttaccgctatctgctgaaattcctgaaccgcaaagatgtggaagtgatcaca
ttgcatggataa
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