Nitrosomonas sp. Is79A3: Nit79A3_0346
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Entry
Nit79A3_0346 CDS
T01569
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
nii
Nitrosomonas sp. Is79A3
Brite
KEGG Orthology (KO) [BR:
nii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nii03021
]
Nit79A3_0346
Transcription machinery [BR:
nii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Nit79A3_0346
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_31
IF2_N
UCR_14kD
KORA
HTH_3
Phage_terminase
HTH_25
HTH_PafC
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AEJ00234
UniProt:
F8GH68
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All DBs
Position
complement(379089..379934)
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AA seq
281 aa
AA seq
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MTNALTLPSLGGSLESYIQSANSFPILSQEEESSLARRLWNHGDIEAAQNLILSHLRFVV
AIARGYKGYGLPQADLIQEGNIGLMKAVKRFDPERGVRLVSFAVHWIKAEIHEFIMRNWR
LVKIATTKQQRKLFFNLRSMKQGLDTMNPQEVEAMATQLGVKSEEVVEMEKRFNGSDISL
EPMSDDEDDTFSPISYLTDGAEPSQILEKEQIISLREKGLQQSLACLDDRSRHIIEARWL
REKDTATLHDLADELGVSAERIRQIEVKALQKMRGVMAVGA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgctttaacgctcccttcattgggaggaagtcttgaaagttatattcagtct
gccaattcttttcctattctttcccaagaggaagagagcagcttggcgcgacgcctgtgg
aatcatggtgatattgaagctgcgcaaaatctaatactatcgcatctgcgttttgtagtc
gcaatagcgcgcggttacaaaggttatggtcttccacaagctgatttgatccaggaaggc
aatatcggtctaatgaaggcagtcaaacgttttgaccctgaacgtggtgtacgcttggta
tcttttgcggtgcattggattaaagctgaaattcatgaatttattatgcgtaactggcgc
ttggttaaaatagctactaccaagcagcaacgtaaattgttctttaacttgcgcagcatg
aaacaaggtttggatacgatgaacccgcaggaagtggaagcgatggccactcagctcggt
gttaaatctgaagaagtggttgaaatggaaaagcgattcaacggttcggatatttcgttg
gagccgatgtctgatgatgaagatgatacattcagtccgatcagctatctgacagacggt
gcagagccttcgcaaattctagaaaaagaacagataatcagcttgcgtgaaaaaggctta
cagcaatcgctggcttgcttagatgatcgcagccgtcacattatcgaagcccgctggtta
agggaaaaagatacggctactttgcatgatctggctgatgagttgggcgtatcagcggaa
cgcatccgtcagattgaagtgaaagcactacagaaaatgcgcggtgttatggcagtgggt
gcttaa
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