Nitrosomonas sp. Is79A3: Nit79A3_0380
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Entry
Nit79A3_0380 CDS
T01569
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
nii
Nitrosomonas sp. Is79A3
Pathway
nii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Nit79A3_0380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nii03400
]
Nit79A3_0380
Enzymes [BR:
nii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nit79A3_0380
DNA repair and recombination proteins [BR:
nii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Nit79A3_0380
RecFOR pathway proteins
Nit79A3_0380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
Mg_chelatase
nSTAND3
Rad17
AAA_3
AAA_22
AAA_14
AAA_18
AAA_2
NB-ARC
TsaE
RNA_helicase
AAA_33
AAA_17
NTPase_1
DUF815
ABC_tran
IstB_IS21
AAA_28
Bac_DnaA
bpMoxR
AAA_24
NACHT
Sigma54_activ_2
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AEJ00267
UniProt:
F8GHQ0
LinkDB
All DBs
Position
407589..408635
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AA seq
348 aa
AA seq
DB search
MIETDRLVAAAPESSQEEILERALRPKQLEEYVGQEKIRGQLQIFIEAARNRNEALDHVL
LFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERPGDLAALLTNLEPNDVLFIDEIHRLS
PVVEEILYPALEDYQLDIMIGEGPAARSVKLDLPAFTLVGATTRAGMLTNPLRDRFGIVS
RLEFYTPQELSKIVIRSARLLKVEISPDGAFEIARRSRGTPRIVNRLLRRVRDFAEVKAD
GHVTHAVADAALSMLDVDAIGLDVMDRKLLLAVIEKFSGGPVGVDNLAAAISEERDTIED
VLEPYLIQQGFLKRTPRGRVATTATYQHFGITLPRNGLSGELWEENNL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacagatcgacttgttgccgcagcgcctgaatcatcccaggaagaaattctg
gagcgtgcgctacgcccaaaacaactggaagaatacgtcggtcaggaaaagattcgcggg
caactgcagatattcatagaggcggcaagaaatcgtaatgaagcgcttgatcatgttttg
ttatttggtccaccgggtctaggtaaaactacgcttgcacatattattgccagagaaatg
ggcgttaatttgcgccaaacatccggtccagttttagaacggccgggagatttggcagct
ttgctgacaaacttggaacctaacgatgttttatttattgatgaaattcatcgactatcc
ccggtggtcgaagagattctgtatcctgcgctggaagattaccagctggatattatgatt
ggtgaagggccagctgcacgttctgtaaaactggatttgcccgcatttactctggtcggg
gctacgacccgcgccggtatgcttactaatccgttgcgtgatcgttttggcattgtttcg
cgtttggaattttacacgccgcaagaattaagcaaaattgtcatacgatcagctaggtta
ttaaaagtagaaatatcacccgatggtgcatttgagattgcgcgccgttcgcgcggaact
ccacggattgttaatcgactgctgcgtcgtgtgcgtgattttgccgaagttaaagccgat
ggacatgtaactcatgcagtagcagacgcggccttaagcatgttggatgtggatgcaatc
ggtttggatgtcatggatcgaaagttgttgttggcagtaatagaaaaatttagtgggggg
cctgttggtgttgataatctcgctgcggcaattagtgaagagcgtgacacaattgaggat
gtgctagaaccttatttgattcaacaaggatttctgaaacgtacaccgagaggtcgtgtg
gcaacgacagcgacttatcaacattttggtattactttgccgagaaacgggctaagcggc
gaattgtgggaagagaataacttataa
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