Nitrosomonas sp. Is79A3: Nit79A3_0854
Help
Entry
Nit79A3_0854 CDS
T01569
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nii
Nitrosomonas sp. Is79A3
Pathway
nii03030
DNA replication
nii03430
Mismatch repair
nii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nit79A3_0854
03430 Mismatch repair
Nit79A3_0854
03440 Homologous recombination
Nit79A3_0854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nii03032
]
Nit79A3_0854
03400 DNA repair and recombination proteins [BR:
nii03400
]
Nit79A3_0854
Enzymes [BR:
nii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nit79A3_0854
DNA replication proteins [BR:
nii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Nit79A3_0854
DNA repair and recombination proteins [BR:
nii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Nit79A3_0854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AEJ00729
UniProt:
F8GLI3
LinkDB
All DBs
Position
complement(940680..944201)
Genome browser
AA seq
1173 aa
AA seq
DB search
MPTSPAFIHLRLHSEYSILDSTVRIPEVVAKAVADQMPALALTDLSNLFGLVKFYQTAYK
NGIKPILGCDVWITNESDRNKPIRLLLLCQSHAGYLLLSRLLSRAYRENQHHGRAEIKES
WLHSNESGTRGLIALSGARFGDIGLSILQNNLQQAEIQTQKWADLFPDRFYIEIQRDGHA
NEAMLVQQSLVLAKKFNLPVVATQAVQFLNPEDYRAHEARVCIAEGHTLDDKRRPRYFTE
QQYFKTQAEITQLFADIPSALANTIEIAKRCNLVLELGINRLPLFPTPNNESLEQYLRDQ
AAAGLIQRMASLFPDEAVHNGKMSKYQSRLEFEVNTIIQMGFAGYFLIVADFINWAKHND
VPVGPGRGSGAGSLVAYSLGITDLDPLRYDLLFERFLNPERVSMPDFDIDFCQDRRELVI
EYVKQRYGTEKVSQIVTFGTMAAKAVIRDIGRVLDLPYNFVDQLAKLIPFEIGMTLKKAR
QLEPQLNQRAAEEEDVRNLLELAESLEGITRNVGMHAGGVLIASGEITDFCPIYCTESGD
SVVSQLDKDDVEKVGLVKFDFLGLRTLTTLDRAVGYIRQSRKKGEPSIAIDSTARPFSLE
TLPLEDERTYALMRKGNAVGIFQFESRGMIDLLQKAKPDCFEDIIALVALYRPGPMDLIP
EFIDRKHGKKTIEYLDPRLEPILGPTYGIMIYQEQVMQIAQVIGGYSLGSADLLRRAMGK
KKVEEMAQQRDIFVNGAVNNGLSKDKATELFGLMEKFAGYGFNKSHAAAYALIAFQTAYL
KAHYPAEFMAACLSADMDDTDKVHIFVEDTIANGLTILPPDINRSGYRFIPADEKTIRFG
LGAVKGTGESAISSIVAVREQTGPFTDLFDFCSRVDRRIANRRVMESLIRVGAFDVINPN
RASLLASVGLAIESAEQMSRSSSQANLFGGEGDQSPMQPQLIHAESWSDREKLRHEKIGL
GYYFSGHPFDTYAAELKRFIRTRLDRLNPSREPQLLAGIIHSIRVQMTRRGRMGVINLDD
GKARVELVIFSELFDANRAWLKEDQLLIAEAKVSNRGYNGEEGEELRITAEQLYDFAGIR
SRFAKQIRIHCDPTTLSQVSSLKTLLAPFSNQTQKPGLSGNNNQPVCPVAVIYHNDFASG
ELELGNDWRVTLHDDLLQSLTAHFKTKNIEIVY
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccagccctgcttttatccatttgcgattacacagcgaatactccattctggat
agcacggtccgtattcccgaggtggttgccaaagcagtggccgatcaaatgcccgcattg
gcgttgactgatctttccaatctttttggtctggtcaaattttaccaaactgcctataaa
aatggcattaaaccgattctcgggtgtgatgtctggatcaccaacgaatccgatcgcaac
aagccaatccggcttttgctgctatgccaatcgcacgccggttatttgctgctatcccgc
ctgttatcacgcgcctaccgggaaaatcaacatcatggcagagccgagatcaaagaatcg
tggttacattcgaatgaatcgggcacgcggggactcatcgctttatcaggcgcccgcttt
ggcgatatcggattgtccattttacaaaataatctgcaacaagcggaaattcagacgcaa
aaatgggctgatttgtttcctgatcgtttctatattgaaatccagcgggatggtcatgcc
aatgaagccatgctggttcagcaatcgctggtattggccaaaaaattcaatctgcctgtc
gttgccacgcaggcagtacaatttctgaaccctgaagattaccgcgcccatgaagcgcgg
gtttgtatcgcagaaggtcataccttggatgacaagcgccgtccgagatattttacagaa
cagcaatatttcaaaacacaagccgagataacccaattgtttgccgatattcccagcgca
ctggcgaatacaatcgaaattgccaagcgctgcaatctggtattggaactgggtatcaac
cggctgccgttgtttccgacgcccaacaatgagagcctggaacaatatctgcgcgaccag
gccgcagccggcctgatacagcgtatggccagcctgtttcctgatgaagccgtgcacaat
ggtaaaatgtccaagtatcaatcgcgccttgagtttgaagtgaatactattattcagatg
gggtttgccggttatttcttgatcgttgccgattttatcaactgggccaagcacaacgat
gttccggtcggtcccgggcgcggctccggggccggttcattagtggcttattcattggga
atcaccgatcttgatccattgcgctacgatctgctgtttgagcgctttctgaatccggaa
cgcgtctccatgcccgattttgacattgatttctgccaggaccggcgcgaattggtcatc
gaatacgtgaagcaacgctacggcacggaaaaagtttcccaaatcgtcacgtttggcaca
atggcggccaaagccgtgattcgcgatatcggccgggtgctggatttgccgtataacttt
gtcgatcagctcgccaaactgataccttttgagatcggcatgacgttaaaaaaagcgcgc
cagctcgagccgcagctcaatcagcgcgccgcggaggaagaagatgtgcgcaatttgctc
gaactggcggaaagcctggaaggcattacacgcaacgtcggcatgcatgccggcggtgtc
ttgatcgcttctggagaaatcacggatttctgcccgatctattgtacggaatccggtgat
tcggtcgtcagccagttggataaggatgatgttgaaaaagttggtttggtcaaattcgac
tttctgggattacgcacgctgaccacactggatcgcgccgtcggctatatccgtcaatcg
cgcaaaaaaggtgagccttctattgcaattgactccacagcccggcctttctcactggag
acactgccgcttgaggatgaacgcacctacgcgctgatgcgaaaaggcaacgcggtcggc
atcttccagtttgaatcgcgcggcatgatcgatttattacaaaaagcaaaacccgattgt
tttgaagacatcatcgcgctggttgcgttgtaccgccccggcccgatggatttgattccg
gaatttattgaccgcaagcacggcaaaaaaacgattgagtatctcgatccccgcctggaa
ccgattctgggtccaacgtacgggatcatgatttaccaagagcaggtcatgcagattgcg
caagtcatcggcggctacagtctcggcagcgccgatttattgcgccgcgcgatgggtaag
aagaaagttgaagaaatggcacaacagcgcgatattttcgtgaatggcgctgtgaataac
ggcctgagcaaggataaagccaccgaactgtttggcttgatggaaaaattcgccggttac
ggctttaacaaatcccatgccgctgcttacgcgctgatcgccttccagaccgcttatctg
aaagcgcactacccggctgaatttatggcggcatgtttgtccgccgatatggatgacacg
gataaagtgcatatttttgttgaggacaccatcgccaatggcttgacgattctgcctccc
gatatcaatcgttccggctaccgttttatcccagccgatgaaaaaaccatccgcttcggt
ctcggtgcggtaaaaggcaccggggaatccgcaattagctcgatcgttgccgtgcgcgaa
caaacggggccgtttaccgatttattcgatttctgtagccgtgtcgaccggcgtatcgct
aatcgccgcgtgatggaatcactgatccgcgttggcgcgtttgatgtcatcaatcccaac
cgtgccagcctgttggcttctgtcggtctggcgatcgaatccgccgagcaaatgagccgg
tcttccagtcaggccaatttatttggtggtgaaggagatcaatcccctatgcagccacaa
ctgattcatgctgaatcatggtccgaccgggagaaacttcgccatgaaaaaatcggcctg
ggttattattttagcggacatccttttgatacctacgccgcagagctaaaacgattcatc
cgcacccggctcgaccggctgaatccaagccgcgaaccgcaactactcgccggaattatt
cattccatccgcgtgcaaatgacgcgccgcggcagaatgggcgtgatcaatctggacgat
ggtaaagcgcgtgttgaattggtcattttcagcgaattgttcgatgcgaatcgcgcctgg
ttaaaagaagatcaacttctgatcgccgaagcgaaagtcagcaaccgcggatacaatggc
gaagaaggcgaagaattaagaatcaccgccgagcagctctatgatttcgcggggatacgc
tcgcgctttgccaaacaaatcaggattcactgcgatcccacgacactcagccaagtttcc
agcctcaaaacgctgctggcacccttctccaatcaaacgcagaaacccggcttatccggt
aacaataatcaaccggtctgcccggtcgctgtcatctatcacaatgactttgccagcggt
gagcttgaattggggaatgattggcgggtaactctgcacgacgatttgctgcaatcgtta
actgcgcatttcaaaactaaaaatattgaaattgtgtactga
DBGET
integrated database retrieval system
