Nitrosomonas sp. Is79A3: Nit79A3_1304
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Entry
Nit79A3_1304 CDS
T01569
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nii
Nitrosomonas sp. Is79A3
Pathway
nii03420
Nucleotide excision repair
nii03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Nit79A3_1304
03430 Mismatch repair
Nit79A3_1304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nii03400
]
Nit79A3_1304
Enzymes [BR:
nii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nit79A3_1304
DNA repair and recombination proteins [BR:
nii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nit79A3_1304
MMR (mismatch excision repair)
Other MMR factors
Nit79A3_1304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEJ01139
UniProt:
F8GFF9
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All DBs
Position
1424068..1426269
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AA seq
733 aa
AA seq
DB search
MTSLLTDLNPQQLEAITLPHQSVLVLAGAGSGKTRVLTTRIVYLIQSGQASPHGILAVTF
TNKAAKEMLTRITAMLPINTRGMWIGTFHGLCHRMLRTHHQDAGLVQTFQILDSADQLAL
VKRILKSLSVDDKKFPPRQVQWFINNAKEAGLRAAYVVADDAFSRRMLEFYQAYEQQCNK
EGAVDFPELLLRSYELLSRNEILCKHYQERFSHILVDEFQDTNPLQYKWLKLLAGAGTQN
VAAVFVVGDDDQSIYAFRGAYSGNMREFERDFGISKVIKLEQNYRSHGNILDAANALIEN
NSERLGKNLWTAEGKGELLRVYNAPNDFDEAAFIVEEVKTLHAEGIALSEMALLYRSNAQ
SRVLEHSLFNAAISYRVYGGMRFFDRQEIKHALAYLRLIANPDDDSALLRVINFPARGIG
ARSLEQLLDDAKLQGGSLWATALQKCGGEAAVMQESPKSLKGIAGFVQLIVMMRQSCSSI
PLPQIVENMLTHSELLVHYAKERESAERLENLNELINAATSFVHEAEDDSLAEFLAHASL
EAGEHQAGSGQDALQLMTVHAAKGLEFHSVFLSGLEEGLFPHENSLNEINGIAEERRLMY
VAMTRARRRLYLSFAQSRMLHGQTRYNIASRFLNEIPEGCLKWLQSTPRIDQKPYYSGAG
KQTMTAIPRTATYSQQKFSSNPWRIGQNVLHAKFGGGVIINCEGSGSEARVQVNFDHAGI
KWLLLEYAKLTAV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacttccttattaacagatctgaatccacagcagctggaagccattacgctaccgcat
caatcggtattggtgctggccggcgctggcagtggaaaaacacgcgtgttgacgacacgt
atcgtttatttgatccaatcagggcaagcaagtccgcacggtattctggccgtgactttc
accaataaagctgccaaggaaatgctgacccgcattaccgccatgctgccgattaataca
cgcggtatgtggattgggacatttcatgggttgtgtcatcgcatgttgcgtacgcatcat
caggatgccggattggtgcaaacatttcagattctggattccgctgatcaactggcttta
gttaagcgtatcctgaaaagtttgtcggtcgacgataaaaaattcccgccgcgccaggtg
caatggtttatcaataatgccaaagaagctggattacgcgctgcctatgttgtagctgat
gatgctttttcccgccgcatgcttgaattttatcaagcttatgagcagcaatgtaacaag
gaaggtgcggtggatttccctgaattgttgctgcgcagttacgaattgctgagccgcaat
gagattctgtgtaagcattatcaggaacgttttagtcatatcctggtggatgaatttcag
gataccaatccattgcagtacaaatggctcaaattgctggctggcgccggaacccaaaat
gtcgcggcagtctttgtggtcggtgatgacgatcaaagcatttatgcatttcgcggcgcc
tattctggcaatatgcgagaatttgaacgtgatttcggtatctccaaagtgattaagctg
gaacaaaattaccgctcgcacggcaatattcttgatgctgccaacgcactgattgaaaac
aatagcgaacgcctagggaagaatctttggaccgccgaaggcaagggcgagctactgcgt
gtttacaatgcaccgaatgatttcgatgaagctgcatttatcgttgaagaagtcaaaacc
ttgcatgcggaaggcattgccttgtctgagatggcattgctctatcgctccaatgcgcaa
tccagggttttggaacacagtttgtttaatgccgccatatcgtaccgtgtttacggcggt
atgcgtttctttgatcgccaggaaatcaagcatgcgttggcttacttgcgcttgattgcc
aatcctgacgacgatagcgcgctattgcgcgtgattaatttcccggcacgcgggattggt
gcgcgcagtctggagcaattgctggatgatgcgaaattgcaaggcggcagtttgtgggcc
acggcattgcagaaatgcggcggtgaagcagccgtcatgcaagaatcgcccaaatcttta
aaaggcattgcaggatttgtccagttgatcgtgatgatgcgtcaaagctgcagcagcata
ccattgcctcaaattgttgaaaacatgctgacgcacagcgagttgctagtgcattatgcc
aaagagcgagaaagtgcggaaagactggaaaatctgaatgaactgattaatgcggcaacc
agttttgtgcacgaagccgaagacgacagccttgcagaatttctcgcgcatgcctcactg
gaagccggtgaacaccaggcgggcagcggccaggatgccttgcagttaatgactgtgcat
gccgccaaaggcttggagtttcatagcgtatttttgagtggcttggaagaagggcttttt
ccgcatgaaaacagcttgaatgagatcaatggtattgcggaagaaaggcgtctgatgtac
gtggcgatgacacgcgcgcgccgcaggttatatttaagttttgcacaaagccgcatgttg
catggccagactcgctataacatcgcatcgcgtttcctgaatgagattccagagggttgc
ttgaaatggttgcaatcaacgcctcgaattgatcagaaaccatactattcgggtgccggc
aagcagaccatgacagctattccaagaactgcaacttacagccagcaaaaattttccagc
aatccatggagaatcgggcagaacgttttgcatgccaagtttggaggaggtgtcattatc
aattgtgaagggagcggtagcgaagcacgtgtccaagttaattttgatcatgccggaata
aaatggttattgctcgagtatgcaaagttaactgcggtttag
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