Nitrosomonas sp. Is79A3: Nit79A3_1591
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Entry
Nit79A3_1591 CDS
T01569
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nii
Nitrosomonas sp. Is79A3
Pathway
nii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nit79A3_1591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nii03019
]
Nit79A3_1591
03016 Transfer RNA biogenesis [BR:
nii03016
]
Nit79A3_1591
Enzymes [BR:
nii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Nit79A3_1591
Messenger RNA biogenesis [BR:
nii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Nit79A3_1591
Transfer RNA biogenesis [BR:
nii03016
]
Prokaryotic type
tRNA degradation factors
Nit79A3_1591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
OB_RRP5_4th
KH_KhpA-B
RNase_II_C_S1
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AEJ01409
LinkDB
All DBs
Position
complement(1690927..1693047)
Genome browser
AA seq
706 aa
AA seq
DB search
MKPIKKSITYGRHQLTLETGEIARQAHGAVMVTMDDTVVLVTVVGAKTIKPGQDFFPLTV
DYQEKFYAAGRIPGSFFKREGRPSEKETLTSRLIDRPIRPLFPEGFYNEVQIVATVMSAD
TEVDADIPSIIGTSAALILSGIPFDGPLGAARVGYINNEYVLNPTTSELKDTQLNLVVAG
TQQAVLMVESEAMELSEEVMLGAVIFGHEQMQAVINAINEFADEAGVTAWDWTPPVKDTS
FEEKIASLAEADLRMAYKIKQKQARSEAIEAISQRISTEIGVDTEGGPDLQSFKEAFFAL
EAKIVRNQILDGEPRIDGRGTRTVRAITIRNGVLPRTHGSALFTRGETQALAVATLGTAR
DEQKIDSLQGDYNDRFMLHYNMPPYATGEIGRVGTPKRREIGHGRLAKRAIAAVLPSPEE
FGYSLRVVSEITESNGSSSMASVCGGCLALMDAGVPLKAHVAGIAMGLIKDGNRFAVLTD
ILGDEDHLGDMDFKVAGTEKGITALQMDIKIQGITKDIMHAALIQAHEGRMHILQIMKQA
LPSTREDISVHAPRIIKIKINPEKIRDVIGKGGAVIRALTEETGTTIDITDDGQVTIACV
SSEGGELARKRIEDITAEVEVGKIYDGIVLKLLDFGAIVSVLPGKDGLLHISQIANERVN
NVSDHLNEGQQVRVKVLEADDKGRLRLSMKAVSADGDSTDSGTEES
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacctattaagaagagtattacctacgggcgccatcaacttacattggaaacaggt
gaaatagcacgacaagctcatggcgctgtaatggttacaatggacgatacagtagtactt
gttactgtggttggtgcaaaaactataaaaccaggacaggatttctttccactcactgtg
gattatcaagaaaaattttacgctgcgggtagaataccgggcagtttctttaaacgagaa
ggacgtccttcagaaaaagaaacactaacttctcgattaattgatcgcccaattcgtccg
ctctttcccgaaggtttctataacgaagtacagatagtagctaccgtaatgtctgcggat
actgaagtggatgcagatattccttccattatcggcacttccgctgcgcttatcctttct
ggaataccgtttgatggcccccttggcgctgctcgcgttggttatatcaacaacgaatac
gttcttaatccaacaacttcagaacttaaagacactcaattgaatttggttgttgcagga
acgcaacaagccgttttgatggtggagtcagaagcaatggagttatcggaagaagtaatg
ctgggcgcggttatatttggccatgagcaaatgcaggcagttatcaatgcaatcaatgaa
tttgctgatgaagcgggtgtaactgcgtgggattggactccgcctgtaaaagatacttcg
tttgaagaaaagattgcaagcctggcagaagccgacttacgaatggcttataagattaaa
cagaagcaggcacgttctgaagcgatcgaggctattagtcaacgaatatctactgaaatc
ggtgttgatacagaaggcggacctgatctgcaatccttcaaggaagcattctttgcattg
gaagcaaaaattgtacgtaaccaaatcctggatggagaaccccgaatcgatggccgtggt
acacgcactgtaagagccataacaattcgaaatggtgtgctacctcgcacacatggttca
gcactatttactcgcggtgaaacacaagccttagcagttgcaacactgggtacggcgcgt
gacgagcaaaaaattgattcactgcaaggtgattataatgatcggtttatgctgcattac
aacatgccaccctatgcaacgggagagattggtcgtgtcggcactcccaagcgccgtgaa
atcgggcatggacgtcttgcaaagcgtgccattgccgcggttctgccttcccctgaagaa
tttggttattccttacgcgtagtatctgaaattaccgaatcaaacggctccagttcaatg
gcatcggtttgtggcggctgtcttgcccttatggatgcgggtgttccgctaaaagcgcat
gtagctggcattgcaatgggcttaattaaagatggaaatcgttttgctgtattaaccgat
attctcggtgatgaagatcatctgggtgatatggattttaaagtagcaggtacggaaaaa
ggcattactgcattgcagatggatattaaaatccagggtatcaccaaagatatcatgcat
gcagcgctgatacaggcccatgaaggacggatgcacatcctgcaaatcatgaaacaagcc
ctgccctcaacccgtgaagatatttcagtccacgctccccgtataatcaaaatcaaaatc
aatccagaaaaaattcgtgacgttatcggtaaaggcggcgctgtcattcgcgcactcacg
gaagaaaccggtacgacgattgatatcactgatgacggtcaggtaaccatagcttgtgtc
agttctgaaggcggtgagctagccagaaaacgaatagaagacattactgcagaagttgaa
gttggtaaaatttatgacggtatagtgctaaaattacttgatttcggcgccattgtcagc
gttcttccaggaaaagacggtttgctgcatatctcacaaattgccaatgaacgtgtcaac
aatgtttctgatcacctcaatgaaggccagcaagttcgcgtaaaagtacttgaagcagat
gacaaaggaagactgcgtctgagtatgaaagcagtatctgccgatggagatagtactgat
tctggaacggaagaatcatag
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