Nitrosomonas sp. Is79A3: Nit79A3_2624
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Entry
Nit79A3_2624 CDS
T01569
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nii
Nitrosomonas sp. Is79A3
Pathway
nii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nit79A3_2624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nii03400
]
Nit79A3_2624
Enzymes [BR:
nii01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Nit79A3_2624
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Nit79A3_2624
DNA repair and recombination proteins [BR:
nii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Nit79A3_2624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Sensor
Motif
Other DBs
NCBI-ProteinID:
AEJ02391
UniProt:
F8GGB7
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All DBs
Position
complement(2805682..2806512)
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AA seq
276 aa
AA seq
DB search
MPELPEVETTRRGIAPHLLGQSIANVIIRNPRLRWPIPGNLSKLLAGLTIQAVTRRAKYL
LLDCGAGTLIFHLGMSGSLRILPYSVMQSIEPPLKHDHFDLILSDQTVLRLRDPRRFGAV
LWHTGDILQHPLLMNLGPEPLTADFNAQQLFEKTRECRASIKQILMNSHVVVGIGNIYAN
EALFLAGINPKIAAGRIGMTRYEKLVQAVKQILQLAIEAGGSSLRDFVNSDGNPGYFQQQ
YWVYGRGRECCKKCDHEIKQIRQSQRSSFYCSRCQH
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagtcgaaaccacacggcgcggtatcgcgccgcatttgctggga
caatccattgcaaatgtaattatccgtaatcctaggctacggtggcctataccgggtaat
ttgtctaagttattggcgggtttaacgattcaagcagtaacacggcgggctaaatatctt
ttgcttgattgcggtgcaggaacattaatttttcatctgggcatgtcagggagtttgcgc
atactgccgtatagcgtgatgcaatcgatagaaccgcccctgaaacatgatcattttgat
ttgattctaagtgatcagactgttctgagattgcgagacccgcgtcgttttggtgcagtg
ttatggcatacgggagatattctgcagcatccgcttctgatgaatcttggtcccgagcca
ttaacagcagatttcaatgcgcagcaattatttgagaaaaccagagaatgccgcgctagt
atcaaacaaattctgatgaatagccatgtggtcgttggcattggtaatatttatgcgaat
gaagctttgtttctagcggggatcaatcccaaaatagccgctggcagaattggtatgacg
cgttatgaaaaactggttcaagcggttaaacaaattttgcagttggcaatcgaagcaggt
ggcagcagtttgcgtgattttgttaacagtgacgggaatcctgggtattttcagcagcaa
tattgggtttatgggcgtggcagggagtgttgtaaaaaatgtgatcacgagattaaacaa
atcagacaaagtcaacgctctagcttttattgttcgcgttgtcagcattga
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