Nitrosomonas sp. Is79A3: Nit79A3_2795
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Entry
Nit79A3_2795 CDS
T01569
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nii
Nitrosomonas sp. Is79A3
Pathway
nii03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nii00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Nit79A3_2795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nii03021
]
Nit79A3_2795
03400 DNA repair and recombination proteins [BR:
nii03400
]
Nit79A3_2795
Enzymes [BR:
nii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Nit79A3_2795
Transcription machinery [BR:
nii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Nit79A3_2795
DNA repair and recombination proteins [BR:
nii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Nit79A3_2795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AEJ02546
UniProt:
F8GHK6
LinkDB
All DBs
Position
complement(2962457..2963461)
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AA seq
334 aa
AA seq
DB search
MQGNELLTPRIIDVQNISPLHAKVVMEPFERGYGHTLGNALRRILLSSMTGFAPTEVKIA
GVVHEYSALDGVQEDIVDILLNIKGIVLKLHNNDEAIITLKKSGKCVVTAGDIDVGHDVE
ILNPDHVLAHLTSDGKIDIQLKIEKGRGYVPATVRKNKNIENSVGTILLDASFSPIRRVS
YTVESARVEQRTDLDKLIMDLETNGVVEPEEAIRFAARVLVQQLSVFADLESTPIPKEQP
QVPQIDPILLRPVDDLELTVRSANCLKVENIYYIGDLIQRTEAELLRTPNLGRKSLNEIK
EVLASRELTLGMKLDNWPPANLDNLAKDSNHAPQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtaatgaattattaacaccacgtattattgatgttcagaatatatctccttta
catgctaaagttgttatggaaccttttgaaagaggatatggccatactttaggtaatgct
ttaagaagaatacttttgtcgtctatgacaggatttgctcctactgaagtaaaaatagct
ggagtagtacatgagtattcagcgcttgacggtgttcaagaagatattgttgatattctt
ctgaatattaaagggatagtattaaagcttcataataacgatgaagctattataactttg
aaaaaatctgggaaatgtgttgttactgctggtgatattgatgttgggcatgatgttgag
atactaaatcctgatcatgttttagcgcatttaacatctgatggaaagattgatattcaa
ttaaaaatagaaaaaggaagagggtacgtacctgctactgttagaaaaaataaaaatatt
gaaaatagtgtaggtacgatcttactggatgcttcattcagtcctatcagacgtgttagt
tatacagtcgagagtgctcgcgttgaacaaagaactgaccttgataaattaataatggat
ttggaaactaatggtgtagttgagcccgaagaagcaatacgctttgctgcgcgtgtactg
gtgcagcaattatctgtgtttgccgatttagagagcacgcctattcctaaggaacagccg
caagtacctcaaatagatcctattttattaaggccagttgatgacctggaactcacagta
agatctgctaattgcttgaaagtagagaacatttattacattggtgatcttattcaacgt
acggaagctgaactactacgtacgcctaatctaggaagaaagtctttaaatgaaataaaa
gaagtccttgcttcacgcgaacttactcttggaatgaaattagataattggccaccggca
aatcttgataatctagctaaggactcaaatcatgcgccacaataa
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