Nitrosomonas sp. Is79A3: Nit79A3_3121
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Entry
Nit79A3_3121 CDS
T01569
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nii
Nitrosomonas sp. Is79A3
Brite
KEGG Orthology (KO) [BR:
nii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nii03016
]
Nit79A3_3121
Enzymes [BR:
nii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Nit79A3_3121
Transfer RNA biogenesis [BR:
nii03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Nit79A3_3121
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AEJ02859
UniProt:
F8GK49
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Position
3303371..3305227
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AA seq
618 aa
AA seq
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MNVFYEEAGTFKVGAILADNNTSLQIEAVHGKRSKIKATSVLFRFDAPPLSEFMNHVQEI
VDELDPDFLWECCAQDTEFASDTLAADYFGHTPNPVEAAATLLLLQNAPMYFYKKGHGRY
KAAPPDALKAALAGQEKKRLQAAQQACYMEQLNQFVLPEEFKPRIPNLLYKPDKNTIEWK
ALEAVCTEKKLTVIKLMEKCGAIPSSHDYHFNQFVWEHFPEGIGFGELEPHPAANDFPGL
PAADVVAFSIDDASTTEIDDAFSVTPLAFGSFRIGIHIAAPALGIDPESTLDKAASSRLS
TVYLPGNKITMLPDVTINHFTLAENRLCPVLSLYLDVADDFTVTATESRIEKIKIAANLR
HNSLEPYFNEATLSKGDFEHTFSKELSLLWKFACKMENQRGKASDTNNDKVDYSFEINND
HITISERRRGSPIDKVVSELMIYVNTEWGKQLTDAGITGIFRSQANGKVKMSTSPAPHQG
LGVSQYAWSSSPMRRYVDLINQRQLIAMLRAEPPHYTKESTSLLIAMRDFETAYGIYSEF
QRAMERYWCLRWLLQEKIQIINAQVIKENLVKFDHIPFVTRVPSLPEMAPNTYVKLKLSE
VDLLERSLHAEFLQKQDT
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttttacgaagaagctggaacctttaaggttggtgccatactggctgataac
aatacctcgttacagattgaggctgtgcatggcaaacggtcaaagatcaaagcaacgtca
gtgctattccgatttgatgcgccgcctttatccgaattcatgaatcatgtgcaagaaata
gtcgatgaattggatccggattttctctgggaatgctgcgcacaggatacagaatttgcc
agcgacactctggcagccgattactttggccatacgcccaatccggttgaagctgcggcc
actttgctgctgctgcaaaacgcgccgatgtatttctataaaaaagggcacggacgctac
aaagcggcaccaccggatgcacttaaagcagctttagccggtcaggaaaaaaaacgcctg
caagctgcgcaacaagcctgttatatggaacaattaaatcagtttgttctgccagaggaa
tttaaaccgcgcatccctaatttactttacaaaccggacaaaaacacgattgagtggaaa
gcactcgaagcggtctgtacagaaaaaaaactcaccgtcataaaactgatggaaaagtgt
ggcgccattccgtcctcacacgattaccatttcaatcagtttgtctgggaacattttcct
gaaggcatcggatttggtgaactcgaaccgcatccggcagcgaacgatttccccggctta
cccgccgcagatgtggttgcattcagtatcgacgacgcctcaacgacggaaattgatgat
gctttttctgtgacacctttagcatttggcagtttccgcatcggcatacatattgcagcg
ccagcgctgggaatcgatcctgagtcaaccctcgacaaagccgcttcatcgcgcctgtcg
acggtttatctgcccggaaacaaaatcaccatgctgccggatgtaacgattaatcacttc
acattagctgaaaaccggttgtgccccgtgctttccctatatcttgatgtagcggatgat
tttaccgtcacagctacggagagccggattgagaaaataaaaattgcagcaaatttacgt
cacaattcactcgaaccgtatttcaacgaagccacattaagcaaaggagactttgaacac
acctttagcaaggaattgagcctgctgtggaaatttgcctgcaagatggaaaaccaacgc
ggcaaagccagtgatacgaataatgacaaagttgattatagttttgaaatcaacaatgac
catatcacaatcagcgaacgccggcgcggatctcccattgataaagtggtgtccgagctg
atgatttatgtcaatacggagtggggcaaacaattgaccgacgcgggcattaccggcatc
tttcgcagtcaagctaatggcaaggtcaaaatgagcacttcacccgcccctcaccaagga
ttgggagtctcgcaatatgcctggagcagttcccccatgcggcgttatgttgatctgatc
aatcagcggcaactcattgccatgttgcgcgccgaaccgccgcactataccaaggagagc
accagtctcttaatcgcaatgcgagactttgaaacagcctatggaatttatagcgaattc
cagcgggcgatggaacgttactggtgtttgcgctggctattgcaggaaaaaattcaaatc
atcaatgcacaggttattaaagaaaatttagtgaaatttgatcatattccattcgttaca
cgggtaccttcactccccgagatggcgccgaatacttacgtcaaacttaaattatctgaa
gtggatctgctggagcgcagcttgcacgcagaattcctgcaaaaacaggatacataa
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