Nitrosomonas sp. Is79A3: Nit79A3_3464
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Entry
Nit79A3_3464 CDS
T01569
Name
(GenBank) SNF2-related protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
nii
Nitrosomonas sp. Is79A3
Brite
KEGG Orthology (KO) [BR:
nii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nii03021
]
Nit79A3_3464
Transcription machinery [BR:
nii03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Nit79A3_3464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_22
Helicase_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AEJ03186
UniProt:
F8GDI0
LinkDB
All DBs
Position
complement(3672026..3674929)
Genome browser
AA seq
967 aa
AA seq
DB search
MHDFKPGQRWICDADLQLGLGTVQTVEHRIVSISFKAVGETRSYAKLSAPLTRVIFKAGD
IISSHDGIALKVIHIKERDGLIVYLGEREGGGRVELAEEQLAHHLQLNRPSERLFAGQFD
RDKWFQIRYQSLLIRNQLANKPLYGLVGTRTSLIPHQLYIAHEVGRRFAPRVLLADEVGL
GKTIEAGLILHQQLLTERAERLLIVVPETLIHQWLVEMLRRFNLQFSIFDEARCLSLEES
DEDEEDGKDQQGENPFQSEQLVLCSQNFLRQNPKRFQQALEGRWDLLVVDEAHHLHWSPQ
AASPQYTMIEQLAMRTRGVLLLTATPEQLGKASHYARLRLLDPHRFSSFSEFITEEQSYE
PIAQAVEALLEGQALNDDTRQLIADMLDPTQAQTLLAELQNQKARNKLAELLLDRHGTGR
ILFRNTRVAVKGFPERKLVASPLPLPAEYLPSLVTFETTPLSKPQLLLCPELIYQVRCEE
DQPYWTEIDPRVNWLIATLKRVKPEKVLVIAANAQTARDLAQAMKQSTGQFIPVFHESMS
LIERDRAAAFFADKETGGQVLICSEIGSEGRNFQFAHHLVLFDLPLNPDLLEQRIGRLDR
IGQTETIQIHVPYLENTALAVMFHWYHEGLNAFEKTCPAGQTVFSQVEDALIAALHQRQT
HGNTLSDLIAATQSANQALNEALDRGRDKLLEYNSFRPAVAEKLYQEARAQGDDPALPRY
METVFDCCGVHIEDHRAGSFLIEPSEHMSMPFPGLMDEGSVITYARNVALANEDMYFLTW
EHPMVIHAMERILNHETGNAVVAALKHKKVQPGTLLLETLFVLEASGQNVQQSNRYLPPA
VIRILLDEQGNGNNPYLDHNAINQHLQPVATGIAKQVIQLKEDAIRELLTASEQQASAQA
PQLIAQAEARIQQTFTPEIERLKALQQVNPNVRDEEIQFFEQQLQQLTGALKSSNLRLDA
VRVIVAT
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcacgattttaagcccggtcagcgttggatttgtgatgctgatttgcaattgggtctt
ggtactgttcaaactgttgaacacagaattgtcagtatcagttttaaggctgtcggtgaa
acccgttcttatgccaaactttccgcaccgctgacgcgtgttattttcaaagcaggagat
atcatcagcagccatgatggtattgcattgaaggttattcatatcaaggagcgtgatggt
ttaattgtctacctgggtgagcgcgaagggggaggccgggttgagctggctgaagaacaa
ttagcgcatcacctgcaactgaaccgcccatcggaacgtttgtttgcgggtcaatttgat
cgagataaatggttccagatacgctatcaatctttgttgatacgcaaccaactggcaaac
aaaccgctgtatgggttggtaggtacccgcaccagtctgattccgcaccaactgtatatc
gcccacgaggtgggccgtcgctttgcgccgcgcgtgttgctggccgacgaagtcgggctg
ggaaaaaccattgaggctggtctgattttgcaccagcaattgctgaccgagcgtgccgaa
cgtttgctcatcgtagttccggaaaccttgattcaccaatggctggtggaaatgttgcgg
cgtttcaatctgcaattcagtatttttgacgaagcgcgctgtttgtctctggaagaaagc
gacgaagacgaagaagacggaaaagatcagcaaggcgaaaatccttttcaaagcgagcaa
ttggtgctgtgcagccagaattttttgcggcaaaatccgaagcgctttcagcaagcgctg
gaaggccgctgggatttgctggtggtcgacgaagcgcatcatttgcactggtcgccacaa
gccgccagcccgcaatacaccatgattgagcaactggccatgcgcacgcggggggtgctg
ctattgaccgcgaccccggagcaattgggtaaagccagccactacgcccgcctgcgtctg
ctcgacccgcaccgtttcagcagtttttccgagtttatcaccgaggagcaatcctacgaa
ccgatcgcccaagcggtcgaagccttgctcgaaggccaggcattgaacgatgacactcgc
caactcatcgcggacatgctcgatccaacccaagcgcaaacattgctggcggagctgcaa
aaccagaaagcccggaataaactcgcggaattattgctcgaccggcacggcaccgggcgc
atcctgtttcgcaacacgcgcgtggcggtcaaagggtttcccgaacgcaagctggtggcc
agtccgctgccgttaccggcggaatacctgccaagcttggtgacgtttgaaaccacgccg
ttatccaagccgcaattgctgttatgccctgaattgatctaccaagtacgatgcgaagaa
gatcaaccgtactggaccgaaatcgacccgcgcgtgaactggctgattgccacgctcaaa
cgagtgaaaccggaaaaagtgctggtcatcgccgccaacgcgcaaaccgcgcgcgatttg
gcgcaagcgatgaaacaatcgaccgggcaatttatcccggtattccacgaaagcatgagt
ttgattgagcgcgaccgcgccgcagcgttctttgccgataaagaaaccggcgggcaggtg
ctgatctgctcggaaatcggcagtgaaggccgcaatttccagtttgcgcatcatctggtg
ctgttcgatctgccgctcaatcccgatttgctagaacagcgcattggccgcctggatcgc
attggtcagacggaaaccatccaaatccatgtgccctatctggaaaacaccgccttggcg
gtgatgttccattggtaccatgagggtttgaatgcgttcgagaaaacttgtccggccggt
caaaccgtcttttcgcaggtggaagacgcgctcatcgctgcgcttcaccagcgccaaacc
cacggaaacacgctgtcagatctgatcgctgccacgcaatcggctaatcaggcattgaat
gaggcattggatcgcgggcgcgataaattgctggaatataattctttccgtcccgccgtt
gcggaaaaactctatcaagaagcgcgcgctcagggcgatgatcccgcactgccgcgctat
atggaaacggtgtttgactgttgcggcgtgcatatcgaagatcaccgtgccggtagtttt
ttgatcgaaccgagcgaacacatgagcatgccgtttcccggtttaatggacgaaggctcg
gtgattacgtatgccagaaacgttgcactggccaatgaagacatgtatttcctgacgtgg
gaacatccgatggtgatccacgcgatggaacgaatcctgaatcatgaaaccggtaacgcg
gtggtcgccgcactgaaacacaaaaaagtgcagccgggcaccttgctgctggaaacgctg
ttcgtgctcgaagcaagcggacaaaacgtacaacaaagcaaccgctacctgccacccgcg
gtaattcgcattttgctggatgagcaaggcaatggtaataatccgtacctcgaccacaat
gcgatcaatcaacacctgcaaccggtcgcgaccggcattgctaagcaagtgattcaactc
aaagaagacgcgatccgcgagctactgaccgcgagcgagcaacaagccagcgcgcaagcg
ccgcaacttatcgcccaagccgaagcgcgcatccaacaaaccttcaccccggaaatcgag
cgtcttaaagccttgcaacaggtgaacccgaacgtgcgcgacgaagaaattcaattcttt
gaacaacaactgcagcaactgaccggtgcactgaaatccagcaacctgcggctcgatgcc
gtgcgggtgattgtggcaacgtga
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