Nitrosomonas sp. Is79A3: Nit79A3_3482
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Entry
Nit79A3_3482 CDS
T01569
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
nii
Nitrosomonas sp. Is79A3
Pathway
nii03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Nit79A3_3482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nii03400
]
Nit79A3_3482
DNA repair and recombination proteins [BR:
nii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Nit79A3_3482
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
AEJ03204
UniProt:
F8GDJ8
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Position
complement(3691899..3694499)
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AA seq
866 aa
AA seq
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MKTQKDQHTPMMQQYLRIKAQHPDMLMFYRMGDFYELFFDDAEKAAKLLGITLTQRGASA
GEPIKMAGVPYHAAEQYLAKLVKSGESVAICEQVGDPATSKGPVAREVTRIITPGTLTDA
ALLEDKRDCILLALWVHESILGLAWLNLAAGQLRVMETSPQNLLSELERLQPSEILLPES
LKQAEIQGKNWALKRLPLWQFDRDTAINNLTRQFETHDLSGFGCEDLPIALCAAGALLEY
ARLTQGSAALPITSLQAERDSIYIRMDAATRRNLEISETIRGERSPTLLSLLDTCSTNMG
SRLLQFWLHHPLRDHAAIQKRLDSVAALIGESEQNNYWVARDLLRQFVDVERITARIALK
SARPRDLSGLRDSLKLLPEVIQAMANGSSERISQLIQAMQIEPALFELLRKSLLEEPGVV
LREGNVIADGYDAELDELRALQNNCGEFLLQLEIREKERTGIPNLKVEYNRVHGFYIEVT
HAHSEKIPADYRRRQTLKSAERYITPELKAFEDKALSAQDRALAREKYLYDELLNVLLGY
IHPLQKMAASVAEIDVLCAFAERAQALDYTAPYLSHEEIFEIDTGRHPVVESQVENFVAN
DVQLGADYTGKPQMLIITGPNMGGKSTYMRQIALIALLAHCGSYVPAKRVRLGRLDQIFT
RIGAADDLASGRSTFMVEMTETANILHNATAQSLVLMDEVGRGTSTFDGLALAFAIARYL
LSKNRSFTLFATHYFELTKLAEEFKQIQNVHLDAVEYKHRIVFLHKVAEGPASQSYGLQV
AALAGVPESVIKVARKHLIKLEQESVKKKPQLDLFSFSIPEPEEDITQEHPLIAMLQNLS
PDELSPRQALEQLYLLKKAIDATNNS
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacccagaaagatcagcatacccccatgatgcagcagtacctgcgcatcaaggca
caacacccagacatgctgatgttttatcgcatgggggatttttatgagttgttttttgac
gatgcggagaaagcggcaaagctcttgggaataactttaacgcaacgcggcgcttctgcc
ggggaaccgattaaaatggcgggagtgccctatcatgcagcagagcagtatctggcaaaa
ctggtcaagtcaggtgaatccgtagccatttgcgagcaggtgggtgatccggcgaccagc
aaaggcccggttgcacgtgaagtcacccgtatcatcacgcctggaacattgacggatgcg
gcattgcttgaggataagcgcgactgcatattattggctttatgggtgcacgaatcgatt
ctgggtctggcttggctgaatctggcagcggggcaattacgcgtgatggagacatcacca
caaaatctgctgagtgagctggagcgtctgcaaccatctgagatcctattgccagaatca
cttaaacaagctgaaatacaaggtaaaaattgggcgctaaagcgattgccgttgtggcag
tttgatcgtgatactgcaatcaataatcttacgcggcaatttgaaacgcatgatctgtct
ggctttggttgtgaggatttgcctattgcgctgtgcgctgccggtgccctactggaatac
gcccgcctgactcaaggatctgctgcgcttcctatcacatcattacaagctgagcgggat
agtatttatattcggatggatgctgccacacgccgcaatctggaaatttctgaaaccata
cgcggtgaacgctcacctacgttgttgtcattactggatacatgctcaaccaatatgggc
agccgtttgttgcaattttggctgcatcatccattacgggatcatgcagcaatacaaaag
cggcttgatagcgttgcagccttaatcggagaaagtgagcagaataattattgggtcgcg
cgagacctgcttcggcaatttgtagatgttgaacggattactgcccgcattgcactcaaa
tcagcgcgcccgagagacttatcgggtttgcgtgatagcctgaaactattgccagaagtc
attcaagccatggcaaatggttccagtgagagaattagtcaattgattcaggctatgcag
atagaacctgcgctctttgagttattgagaaaatctttgttggaagaacctggtgtggtg
ttgcgtgagggcaatgtgattgccgatggttatgatgccgaactggacgaattacgtgcc
ctgcaaaataattgcggtgaattcttactgcagttggagattcgtgaaaaagaacgcacc
ggcattcctaatctcaaggtggaatataaccgtgtgcatggtttctatattgaagtcacg
cacgcacacagcgagaaaattcccgctgattaccggcgcagacaaacactaaaaagtgct
gagcgttatatcacgccggaactaaaagctttcgaagataaagcattatccgcgcaagac
cgggcattggcgcgggagaagtatttatacgatgaacttttgaatgtacttctgggttat
atccatccattgcagaaaatggctgcgagcgttgcggaaattgatgttttatgtgcattt
gctgagcgtgcacaagcgcttgactatactgcaccatatttgtcgcatgaggaaattttt
gagatagataccggtcgccacccggttgtggaaagtcaggtagaaaactttgttgccaat
gatgttcagttaggtgctgactataccgggaaaccgcaaatgttgataattactggcccc
aatatgggcggtaaatcaacctatatgcggcaaatcgcgctgatcgctttacttgcacat
tgcggcagttatgtgcctgccaaaagagtacgtctgggtaggctggatcagatctttacc
cgtattggcgctgccgatgatcttgccagcgggcgttccacatttatggtggaaatgacg
gaaaccgccaatatactccataacgcaacagcgcaaagcctagtgcttatggatgaagtc
gggcgcggcacttccacttttgacggcttggccctagcgtttgccattgcccggtatcta
ttgagtaaaaatcgcagctttacactttttgccacgcattactttgaattaacgaaactg
gctgaggagtttaaacaaatccaaaatgtccatttggacgccgtggagtataaacatcgc
attgtttttctgcataaagtagccgagggtccggccagtcaaagctacggtttgcaagtt
gctgcactggcaggtgttccagagtcagtgatcaaagtggccagaaagcacttgattaaa
ctggagcaggaaagtgtaaaaaagaaacctcagttggatctgttttccttttccattcca
gaaccggaagaagatattacgcaggaacatccattgattgcaatgttacaaaacctctcg
ccggatgaactaagccccaggcaagcgctggagcagctttatttattgaagaaagcgata
gatgcgacaaataacagctaa
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