KEGG   Niabella insulamsoli: ABDK00_003450
Entry
ABDK00_003450     CDS       T11434                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
nij  Niabella insulamsoli
Brite
KEGG Orthology (KO) [BR:nij00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nij03400]
    ABDK00_003450
Enzymes [BR:nij01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ABDK00_003450
    5.6.2.6  RNA 3'-5' helicase
     ABDK00_003450
DNA repair and recombination proteins [BR:nij03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ABDK00_003450
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: XTN42085
LinkDB
Position
799477..801939
AA seq 820 aa
MDKIQTTTGYGIVEAWFQSSGNRPFAFQQESWERFHQGYSGLVIAPTGLGKTFSVFFSVV
IHYLNYPNEYGNGLKLIWITPLRALAKDLARAMSEALEQLGLDWEVGVRNGDTPAAERQR
QSKRMPDVLIITPESLHLLFAQKNNTAYFKYLKCVAVDEWHELLGSKRGVLTELAISRLR
HIAGGLRIWGISATIGNIDEALQVLIPYADHAKTIVRARQEKKTEIITILPDEIEILPWA
GHLGTKMAASLVPIIEKSRTTLVFTNTRGQSELWYQVMLTVAPDLAGHLAIHHGSIDMEL
RTWIEDMLHTGQLKAVICTSSLDLGVDFKPVDTVIQIGSPKGVARFLQRAGRSGHSPFET
SKIYFLPTHSLELVEAAALKEAAQKAVIESRTPLVQTFDVLVQYLVTLAVGEGFEQADVY
RQVTQTYAFSYMMPEEWQWILKFITQGGEVLSAYEDFQKVVVEEGIYKVKNRRIAMMHRM
NLGVIVSDPMLKVKFLAGGYIGMVEEYFVSKLKPGDKFGLAGKILEFVMIKEMTVLVKKS
NAKRAITPSWLGGRLPLSSNLSAFLRHKFNEAKNAGNKGPELKKLKPLFEHQQQHSHIPK
DDEFLIEMIHTRDGHHLFMYPFEGRLVHEVMSALVAYRISRTQPISFSMAMNDYGFELLS
DQPIDFDKIDMLEILSAANLTEDISRSINAAEMAGRKFRDIAVIAGLVMKNYAGKFKTDK
NLQSSAGLIFRIFEQYDPQNLLMRQAFEEVFYQQLEEPRLAAALQRIQQSRLIIVNAKAF
TPLSFPIKVDSLRQDLSSEALDEKVRKMQQEALQRAGSRN
NT seq 2463 nt   +upstreamnt  +downstreamnt
ttggataaaatacaaacaacaaccggatatggaattgtcgaagcatggtttcagtcttct
ggcaaccggcccttcgcatttcagcaggaaagctgggagcgttttcatcagggctattcg
ggattggtcattgcgccgaccggtttgggaaaaaccttttctgtttttttttccgtggtg
atccactatctcaattaccccaatgagtatggtaatggtttaaagctgatctggatcacg
ccgctgcgggcattggccaaagacctggcgcgtgccatgtcggaagcgctggagcagttg
gggcttgactgggaagtcggtgtccgtaatggcgacacgccggcagcagagcggcaacga
cagtcaaagcgcatgcccgatgtgctgattatcacacccgaaagcctgcatttgttattc
gcgcaaaaaaataatacggcttactttaaatatttgaaatgcgtggccgtcgatgaatgg
cacgaacttctaggtagcaaaagaggcgttttaaccgagctggccatttcgcggctccgg
catatagcgggagggcttcgcatctggggcatcagcgctaccatcggaaatattgatgag
gcgctgcaggttttaattccttatgccgatcatgctaagacaatcgtcagagccaggcaa
gaaaagaaaacggaaatcattactatccttcctgatgaaatagaaattttaccctgggca
gggcatttgggaacgaagatggcagcgagccttgttccgattatcgaaaaaagccgcacc
acgcttgttttcacgaacacgcgtgggcaaagtgaactttggtatcaggtgatgcttacg
gtggcgcccgacctggccggccacctggcgattcatcatgggtccatcgatatggagttg
agaacatggattgaagatatgctgcataccggacaactgaaagcagtgatttgtacttct
tccctcgatttgggtgtagattttaaacctgtggacacggtgattcaaatcggctcgccg
aaaggcgttgcgaggtttctgcagcgtgccggacgcagcggccattcgccttttgaaacg
tcgaagatatattttcttcctactcattctttagaacttgttgaggctgcagctttaaaa
gaggcggcgcagaaagctgttatcgaaagccgcacaccgctggtgcaaacctttgatgtg
ttggttcaatacctggttaccctggcggtgggcgaaggatttgagcaggccgatgtttac
aggcaggtgacacaaacgtacgctttcagttacatgatgccggaagaatggcagtggata
ttaaaatttataacccagggcggcgaggttttatcagcctacgaagattttcaaaaggta
gtggtcgaagaggggatttataaagtgaagaaccggcgcatcgccatgatgcatcggatg
aatttgggcgttatcgtaagcgatccgatgttgaaagtgaaatttttagccggtggttat
attggaatggtagaggagtattttgtttctaagctgaagccgggagataaattcggcctc
gccggtaaaatactggagtttgtgatgattaaggaaatgacggtacttgtaaagaaaagc
aacgcaaaaagagcgattacgccgagctggctgggcggccggctgccactcagttcaaat
ctgagcgcttttttgcgacataagtttaatgaggccaagaacgccggaaataaggggcct
gaattgaaaaaactgaaaccgctgtttgaacatcaacaacagcattcgcatattccaaaa
gacgatgagtttctgatcgaaatgattcacacacgcgatggccaccatttgtttatgtat
ccttttgaaggccggctggtgcacgaagtaatgagcgcactggtagcttatcgcatcagt
agaacgcaacccatcagcttttcaatggcaatgaacgattacggttttgaactgttgagc
gatcaacccatcgattttgataaaattgatatgcttgaaatattatccgcagcaaacctg
actgaagatatttcgcgaagcattaacgctgctgaaatggccggaagaaaattcagggat
attgccgtcattgccggattggtcatgaaaaattatgccggcaaatttaaaactgataaa
aatctgcagtcgtcggccggtttgattttcaggatatttgaacagtacgacccgcaaaat
cttttaatgcgccaggctttcgaagaagtgttctatcaacagctagaagaaccgcggctg
gcagcagctttgcagcgtattcaacaaagccgccttattattgttaatgctaaggctttt
acaccgttgagttttccaattaaagtggacagcctgcggcaggatttaagcagcgaagcg
ctcgacgaaaaagtaagaaaaatgcagcaggaagccctgcagcgcgcgggctcaagaaat
tag

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