Niabella insulamsoli: ABDK00_006830
Help
Entry
ABDK00_006830 CDS
T11434
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nij Niabella insulamsoli
Pathway
nij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABDK00_006830 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nij03019
]
ABDK00_006830 (pnp)
03016 Transfer RNA biogenesis [BR:
nij03016
]
ABDK00_006830 (pnp)
Enzymes [BR:
nij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ABDK00_006830 (pnp)
Messenger RNA biogenesis [BR:
nij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABDK00_006830 (pnp)
Transfer RNA biogenesis [BR:
nij03016
]
Prokaryotic type
tRNA degradation factors
ABDK00_006830 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_Vigilin
KH_2
Glyco_hydro_46
Motif
Other DBs
NCBI-ProteinID:
XTN42738
LinkDB
All DBs
Position
1604286..1606460
Genome browser
AA seq
724 aa
AA seq
DB search
MLQQPLRKSFDLGDGREVTIETGRLARQADGSVTVSIGKMMLLATVVANTEPKEGQSFFP
LTVDYQEKFASAGRIPGSFFKREGKLSDYEVLTSRLIDRAIRPLFPDDYFCEVQVLVTLI
SSDPEILPDAFACLAASAALAVSDVPIKEILSEVRVARVDGAFKVNPTRAELEGADMDFI
IAATEKNLMMVEGESEECSESDLIDALAVAHDAIRIQIKAQQELRELKGVTGKREYTLPA
VNEAMQEKVYAFASQKVYDIAKGKSAKHDRTDQFKALQEELLAQLVEESTEENPFTESDK
KLAIKYFHDVQYDVVRDMVLNDRTRLDGRALNEIRPLDMEVDVLPSPHGSALFTRGETQS
LTTVTLGTGLDELLIETAASSKYSKFILHYNFPPFSTGEVKPMRGPGRREVGHGNLAMRS
LKQMMPSEAEFGYTVRVVSDILESNGSSSMATVCAGSMALMDAGVPFGKHVAGIAMGLIT
KGEKYSILSDILGDEDHLGDMDFKVTGTRDGICGVQMDIKVDGLSMEVMKEALEQAKAGR
LHILEHMYKAIPEARSEVKPHAPRVVKMFIDKEFIGAVIGPGGKVIQEIQRETGATINIE
EVNNMGEISIFGVEKEAVSKAEDWIKGIVAVPVVGDVYDATVKSVVPFGAFVEFLPGKQG
LVHISEVSWKRLESLDGLVKEGDAMKVKLIGTDPKSGKFKLSRKALIPKPERKPEAGANE
APQQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgttacaacaacccttaagaaaaagcttcgatttaggcgatggccgcgaagtaactata
gaaacgggccgtttggctcgtcaggctgatggttccgttaccgtaagcatcggcaaaatg
atgttgctggcaaccgtagttgccaataccgaacccaaagaaggacaaagcttttttccc
ctgactgttgactatcaggagaaatttgcttctgccggccgcattccaggttcatttttt
aaacgcgaaggaaaacttagcgattatgaggtgttgacctctcgtttgattgaccgtgcg
atcaggcctttattccccgacgattatttttgtgaagttcaggtgttggtgacgctgatc
agcagcgaccctgaaattttgcccgacgcgtttgcctgcctcgcagcttcagcggcgctt
gcagtgtcagatgtgcccatcaaagaaattttaagcgaagtgcgggtagcccgtgttgac
ggcgctttcaaagtaaacccaactagggccgaattagaaggcgcggatatggatttcatc
atcgcagcgacggaaaaaaacctgatgatggtggagggagaatcggaagagtgttctgaa
tcggatttaatcgatgctctcgcggttgctcatgatgcgattcgtattcaaatcaaggcc
cagcaggaacttagagaactgaaaggcgtaacgggtaaaagagagtataccttgcctgcc
gttaacgaagcgatgcaggaaaaagtatatgcttttgccagccagaaagtgtatgatatt
gccaaaggaaaatctgccaagcacgatcgtacggatcagttcaaagcgctgcaggaagag
ctgcttgcccagttggttgaggaatcaacggaggaaaatccgtttaccgaatcggataaa
aaactggcgattaaatattttcatgatgtgcaatatgatgtagtgcgtgatatggtctta
aacgatcgcacccgcctcgacggccgtgcgctgaacgaaatcaggcccttggatatggag
gtagatgtattaccttctccacacggatccgccttatttacaagaggtgaaactcaatct
cttacaactgttacattaggtaccggtttagatgaattgttgattgagaccgcggcctct
tccaaatattctaaatttatccttcactataatttcccgccgttctcaaccggcgaggtg
aagccaatgcgcggccccggccgtcgcgaagtaggacatggtaacctggcgatgcgttcg
ctaaaacaaatgatgccttctgaagcagaatttggttatacggtacgcgtagtaagcgat
atcctcgaatctaacggatcttcttctatggcaacggtttgtgcgggttctatggcgttg
atggatgccggcgttccttttggaaaacatgttgctggtattgctatgggattgattacc
aaaggagaaaaatattctatcttaagtgatatattaggtgatgaagatcatctgggagat
atggacttcaaagttaccggcacacgtgacggtatctgcggcgttcagatggatatcaaa
gtagacggcctttcaatggaagtaatgaaagaggcgttggagcaggcgaaagccggccga
ttacatattctggagcatatgtacaaagcgattccggaagccagaagcgaagtaaaacct
catgctccacgagtggtgaagatgtttattgataaagaattcattggtgcggtgatcggg
ccaggcggtaaagtgatccaggaaattcagcgcgaaacaggcgctaccatcaatattgag
gaagtgaacaacatgggcgagatcagcattttcggtgtagaaaaagaagccgtatcgaaa
gccgaagactggatcaaaggtattgtggctgttccggtagtgggcgatgtttacgatgcg
accgtgaagtcagtggttccttttggtgcatttgttgaatttttacctggcaagcaggga
ttggtacatatcagcgaagtaagctggaagcgtttggaaagcctcgacggactggtaaaa
gaaggagatgcgatgaaggtaaaactaatcggaacagatcccaaatccggtaaattcaaa
ctttcaagaaaggcattaataccaaagcctgaaagaaaacctgaagcgggtgctaatgaa
gccccacaacaataa
DBGET
integrated database retrieval system
