Niabella insulamsoli: ABDK00_007210
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Entry
ABDK00_007210 CDS
T11434
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nij Niabella insulamsoli
Pathway
nij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABDK00_007210 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nij03019
]
ABDK00_007210 (groL)
03110 Chaperones and folding catalysts [BR:
nij03110
]
ABDK00_007210 (groL)
03029 Mitochondrial biogenesis [BR:
nij03029
]
ABDK00_007210 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nij04147
]
ABDK00_007210 (groL)
Enzymes [BR:
nij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ABDK00_007210 (groL)
Messenger RNA biogenesis [BR:
nij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABDK00_007210 (groL)
Chaperones and folding catalysts [BR:
nij03110
]
Heat shock proteins
HSP60 / Chaperonin
ABDK00_007210 (groL)
Mitochondrial biogenesis [BR:
nij03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ABDK00_007210 (groL)
Exosome [BR:
nij04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABDK00_007210 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ABDK00_007210 (groL)
Exosomal proteins of breast cancer cells
ABDK00_007210 (groL)
Exosomal proteins of colorectal cancer cells
ABDK00_007210 (groL)
Exosomal proteins of bladder cancer cells
ABDK00_007210 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XTN42814
LinkDB
All DBs
Position
1681832..1683472
Genome browser
AA seq
546 aa
AA seq
DB search
MAKQLYFDVEARNKMKKGVDALANAVKVTLGPKGRNVVIEKKFGAPSVTKDGVTVAKEIE
LEDPIENMGAQMVKEVASKTADIAGDGTTTATVLAQSIISEGLKMVAAGSNPMDLKRGID
KAVSLVVENLKTQSQTVGSDSKKIKQVASISANNDEQIGDLIAQAFGKVGKEGVITVEEA
KGTETYVDVVEGMQFDRGYISPYFVTNSEKMEAELQNPYILIYDKKISAMKDILSILEKV
AQSGRPLAIIAEDLEGEALATLVVNKLRGTLKVAAVKAPGFGDRRKEMLQDIAILTGGTV
ISEDMGHKLEGADIAALGQAASITIDKDNTIVVGGKGKKADITGRVNQIKAQIESTTSDY
DKEKLQERLAKLSGGVAVLYVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVAYI
RAVASLDVKVKGQIEDEQTGMAIVKRALEAPIRTLTDNAGIDGSIVVQKIKDGTGDFGFN
ARTESYENLFKAGVIDPTKVSRVALENAASIAGMLLTTECVVADKPEPKTAAPAMPGGHD
MGGMGY
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaactttacttcgacgtagaagcaaggaataaaatgaaaaaaggcgttgat
gctttagcaaacgctgtgaaagtgacattaggccctaaaggccgcaatgtggttatcgag
aaaaaatttggcgcgccttcagtaaccaaagatggtgttaccgtagccaaagaaattgaa
ctggaagatcccatcgaaaacatgggtgcgcaaatggtaaaagaagtggcttctaaaact
gcggacatcgcgggcgacggaactacaaccgctactgttttggctcaatctatcatcagc
gaaggcctgaaaatggtagccgcgggttctaatccaatggatttgaaaagaggaatcgac
aaagcggtttccctggtggttgaaaatttaaaaacacaaagccaaactgtaggcagcgac
agcaaaaagatcaaacaagtagcttcgatttctgctaacaacgacgagcaaattggtgat
ttaatagctcaggctttcggtaaagtaggaaaagaaggcgtgatcaccgttgaagaagct
aaaggaaccgaaacttatgttgacgtggtggaaggtatgcaattcgatcgcggatacatt
tctccttactttgttaccaatagcgaaaaaatggaagctgaattgcagaatccatatatc
ctgatctacgacaaaaagatcagcgctatgaaagatattctttccatccttgaaaaagtg
gcgcaaagcggccgtcctttggcaatcattgcagaagacctggaaggcgaagcattggct
actttggtggtgaataaattgcgtggtactttgaaagtggctgcagttaaagcgcctggt
tttggagacagaagaaaagaaatgttacaggacatcgctatcttaactggcggtactgtt
atttctgaagatatgggccacaaattggaaggcgctgatattgctgcgttaggccaggcg
gcttctatcacaatcgacaaagacaataccattgttgtaggcggtaaaggcaaaaaagct
gatattaccggacgtgtaaatcagatcaaagctcaaatcgaatcaaccacttccgattac
gataaagaaaaattacaagagcgcttagcaaaattaagcggcggtgttgcggttctttat
gtgggcgctgctactgaggttgaaatgaaagaaaagaaagacagggtagatgacgcatta
catgcaacacgtgcggctgttgaagaaggcatcgttccaggtggtggcgtggcttatatc
cgcgctgtagcgtctttggatgtgaaagtaaaaggacagattgaagatgagcaaaccggt
atggctatcgttaagcgtgcgctggaagctccgatccgcactttaactgataatgccggc
atcgacggttcgatcgttgttcagaaaatcaaagacggcactggagactttggtttcaat
gcaagaactgaatcttatgaaaacctgtttaaagcgggtgttatcgacccaactaaagta
agccgcgtagctttggaaaacgcagcttctatcgctggtatgttgttaactaccgaatgt
gtagttgctgacaagccagaacctaaaacggcggctcctgctatgccaggtggccacgac
atgggtggaatgggttattaa
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