Niabella insulamsoli: ABDK00_011055
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Entry
ABDK00_011055 CDS
T11434
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nij Niabella insulamsoli
Brite
KEGG Orthology (KO) [BR:
nij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nij03009
]
ABDK00_011055 (rimO)
Enzymes [BR:
nij01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ABDK00_011055 (rimO)
Ribosome biogenesis [BR:
nij03009
]
Prokaryotic type
ribosomal protein modification factors
ABDK00_011055 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XTN39941
LinkDB
All DBs
Position
complement(2673781..2675088)
Genome browser
AA seq
435 aa
AA seq
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MKAKTLKKDKVNIITLGCSKNMVDSEVLSGQLRANDIDVVHENARRDHNIVVVNTCGFID
KAKEESINTILEQVELKKHGRLDKVYVTGCLSERYKNNLEEEIPEVDAFFGTMELPSILK
QFEADYKTELVGERFLATPKHYAYLKISEGCNRTCTFCAIPLMRGKHISKPIEELVLEAE
KLVRMGVKEVMLIAQELTYYGLDIYKKRMLSELLHRLADVKGLEWIRLHYAYPTKFPVEI
LDVMRERDNICNYLDIPLQHASDRMLSAMKRQITKADMNELIATIREKVPGICLRTTLIA
GFPGETQDDIDELKAFLDQHRFDRVGVFTYSHEENTGAYQYEDNVPQEEKERRAQEIMEH
QQEISYELNQEKIGKVFKTLIDKKEAGRYIGRTEFDSVEVDNEVIISSSQKLKIGEFYQV
RIEKAYDYDLEGVVV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcgaaaactctaaaaaaggataaggtaaatattattacgctgggttgtagtaaa
aacatggtggatagtgaggtgttgagcgggcaactacgcgctaatgatattgatgtggta
cacgaaaatgccaggcgcgatcacaatattgttgtagtgaacacctgcggtttcatcgac
aaagcaaaagaagagagtatcaacaccattctcgaacaggttgagttgaaaaagcatggc
cggttagataaagtatatgtgacaggctgcctcagcgagcgctataaaaataatctcgaa
gaagaaattccggaagtagatgcttttttcggaacaatggagctgccttcaattttaaag
cagtttgaggctgattataaaacggaattagtgggcgaacgtttcttagcaacgcccaag
cattatgcctacctgaaaatatccgaaggctgtaaccgaacctgtactttttgcgccatt
cctttaatgcggggcaaacatatcagcaagccgattgaagaattagttctcgaggcggaa
aaactggtgcgcatgggcgttaaggaagtgatgctgattgcgcaggaacttacttactat
ggcctcgatatctataaaaagagaatgttgtccgagctattacatcgtcttgctgacgtg
aagggcctcgagtggatccggctgcactacgcttaccccacgaagtttcctgtcgaaata
ctggatgtgatgcgggagcgcgataatatttgcaactatcttgatattcctttgcagcac
gcttccgaccgtatgttaagcgccatgaaaaggcaaataacaaaggccgatatgaacgaa
cttatcgcaacgatccgcgaaaaagtgcccggcatttgcctgcgcacaactttgatcgct
ggtttccctggcgaaacgcaggatgatattgacgaattaaaagcctttttagatcagcac
cgcttcgacagggtgggtgtgtttacctattctcacgaggaaaatacgggcgcttatcaa
tatgaagataatgtgccgcaggaggaaaaagagcgccgtgcacaggaaattatggagcat
cagcaagaaatttcttacgaactcaaccaggaaaaaataggaaaggtttttaaaaccctg
atcgataaaaaagaagcggggcgttacattggccgtaccgagtttgacagtgtcgaagtt
gataatgaggtaattatcagcagttcccagaaattgaaaatcggagaattttaccaggta
cgcatcgaaaaggcgtatgattacgacctcgaaggcgtagtggtttag
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