Niabella insulamsoli: ABDK00_012705
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Entry
ABDK00_012705 CDS
T11434
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
nij Niabella insulamsoli
Pathway
nij00900
Terpenoid backbone biosynthesis
nij01100
Metabolic pathways
nij01110
Biosynthesis of secondary metabolites
Module
nij_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
nij00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
ABDK00_012705
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nij01006
]
ABDK00_012705
Enzymes [BR:
nij01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
ABDK00_012705
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
ABDK00_012705
2.5.1.29 geranylgeranyl diphosphate synthase
ABDK00_012705
Prenyltransferases [BR:
nij01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
ABDK00_012705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
bpX4
Motif
Other DBs
NCBI-ProteinID:
XTN40260
LinkDB
All DBs
Position
complement(3071034..3072086)
Genome browser
AA seq
350 aa
AA seq
DB search
MSTKMRQPMYGDLMKSMLAEYGAVTLKGIRHFIPDKEPRKYLYDLVLDYPNRGGKGFRPG
LCIAACKAYGGTLQQVLYAAVTLELLHNAFLIHDDIEDESLSRRNRPTMHQYTSTAIAVN
VGDAMQALGLFPLLKHKKILGPALSLKVFEEVQHMVEVSAEGQAIELGWRQDNICDLKDE
DYLRMILKKTCWYTCIHPIRIGAIIGSNGKVKPELFNRLGYFMGTAFQIQDDLLNLLAEE
KKYGKEIGGDIVEGKRTLMLIRLLQLCSKSEKAMIGHHLSIPIKERNAQTATDILRLMHR
YDCLDYSKNISKYMAGAALKEFYTIFSRLPDSKDKSFLESIILYMINRDY
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactaaaatgcgacaacctatgtatggagacctgatgaaatcgatgctggccgaa
tatggcgctgttaccttgaaaggaatccggcattttataccggataaagaaccccgaaaa
tatttgtacgatctggtgctcgattacccgaaccgcggtggaaagggattccggccgggc
ctctgcatagccgcctgcaaagcctatggtggtacgcttcagcaggtgctgtatgcggct
gttaccttagagttgttgcacaatgcctttttgatacatgatgatattgaagatgaaagt
ttgtcgaggcgcaaccggccaacgatgcaccagtacaccagcacagcaatcgcggtgaat
gtgggggatgcgatgcaggcgcttggcctgtttccgcttttgaagcataaaaaaattttg
gggccggcgctgagcctgaaagtttttgaagaagtgcagcacatggtcgaagtatcggca
gaggggcaggccatagaactgggctggcgccaggataatatttgtgatttgaaagacgag
gattatttaagaatgatacttaaaaaaacctgctggtacacctgcattcatcccattcgt
atcggagccataattggcagcaacggcaaagtgaagccagaactttttaaccggctggga
tattttatgggtactgcttttcaaatacaggacgatcttttgaacctgttggcagaagaa
aagaaatacggaaaggagataggcggcgatatcgtggaaggtaaaagaacactgatgttg
atccggctgctgcaactatgcagcaaatcggaaaaggcgatgataggccaccatctttca
attcccataaaagaaaggaacgcccaaacggcaacggacatacttcggctgatgcatcga
tacgattgcctcgattattcaaaaaatatatccaagtatatggctggcgctgccttaaaa
gagttctataccattttttcaagactgccggactctaaagacaaatcctttctggaaagt
attattctttatatgatcaaccgcgattattaa
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