KEGG   Niabella insulamsoli: ABDK00_015475
Entry
ABDK00_015475     CDS       T11434                                 
Name
(GenBank) pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
nij  Niabella insulamsoli
Brite
KEGG Orthology (KO) [BR:nij00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nij03009]
    ABDK00_015475
Enzymes [BR:nij01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     ABDK00_015475
Ribosome biogenesis [BR:nij03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    ABDK00_015475
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2 SYY_C-terminal
Other DBs
NCBI-ProteinID: XTN40804
LinkDB
Position
complement(3690535..3691620)
AA seq 361 aa
MKKVDPRFAKFVKTKSNAAIKEGFKQEKRKYKQERAAFFEQKKKEAVQKKEEAPLIERKK
VVVEQMPLNKYLAHGGISSRREAAEMIRDGKVKVNGKVVTEPGYKMAAGDEVTANGKRVA
ITKNLVYILLNKPKDYITTTDDPQKRKTVLDIIKNATKERVYPVGRLDRNTSGVLLITND
GELAQKLTHPSNEVKKIYAVTLDKPLEKAHFDKILKGVTLEDGPAHVDVLAYSDTSDKRQ
VGVEIHSGRNRIVRRIFESQGYDVKNLDRVMFAGLTKKNVERGKYRFLAEKEVRNLKYLG
KDRKAPKPEARPAAASPAKSKTAKPKIVKPVSKSIKESKAGDQKKMVKKDQKLAKPARGS
K
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaaaaaagtcgatccccgcttcgcaaagtttgtaaaaacaaaaagcaacgctgccatt
aaagaagggtttaagcaggaaaaaaggaagtacaaacaagagcgtgctgccttttttgag
caaaagaaaaaggaagcggtgcaaaaaaaggaagaagcgcctctcatagaacggaaaaaa
gtcgtggtggagcaaatgccgcttaacaaatatctcgcgcacggaggcatcagcagcagg
cgcgaagcggccgagatgattcgcgatggcaaagtgaaagtgaatggcaaagtggtcacc
gagcctggttacaaaatggctgccggagatgaggttactgccaacggaaaacgggtagct
atcacaaaaaatttggtttatattcttttaaataaacctaaagactatattactaccacc
gacgaccctcaaaagcggaaaaccgttttagatattattaaaaatgcaactaaagagcgc
gtctatcccgtggggcggctcgaccgcaatacttccggggtattattgattaccaatgat
ggtgagctggcgcaaaagcttacgcatccaagcaatgaggtaaaaaagatttacgcagtt
acgctcgataagccattagagaaggcacattttgataaaattttaaaaggcgtgacgctg
gaagacggtccggcgcatgttgatgtgttggcctatagcgacacaagcgataagaggcag
gtcggcgtggaaattcacagcggccgcaaccgcatcgtcaggcgcatttttgaaagccag
ggctatgatgtgaaaaacctcgatcgtgtgatgtttgcaggattgacgaagaaaaatgtg
gaacgcggcaagtatcgttttttggcagagaaggaggttcgcaacctgaaatatctggga
aaggatcgcaaagcgccgaagccggaggccaggccagccgccgcttcgccggcgaaaagt
aagaccgcaaagccgaaaatcgtaaaaccggtttcaaaaagtataaaagaaagcaaagca
ggcgatcaaaagaaaatggtaaaaaaagaccagaaattggccaagcctgcgcggggatcg
aagtag

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