Niabella insulamsoli: ABDK00_016250
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Entry
ABDK00_016250 CDS
T11434
Name
(GenBank) ATP-binding protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
nij Niabella insulamsoli
Pathway
nij03030
DNA replication
nij03430
Mismatch repair
nij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABDK00_016250
03430 Mismatch repair
ABDK00_016250
03440 Homologous recombination
ABDK00_016250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nij03032
]
ABDK00_016250
03400 DNA repair and recombination proteins [BR:
nij03400
]
ABDK00_016250
Enzymes [BR:
nij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABDK00_016250
DNA replication proteins [BR:
nij03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABDK00_016250
DNA repair and recombination proteins [BR:
nij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABDK00_016250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DUF7876
Motif
Other DBs
NCBI-ProteinID:
XTN40954
LinkDB
All DBs
Position
complement(3862743..3863951)
Genome browser
AA seq
402 aa
AA seq
DB search
MQFTDVIGQQQLKTELTELMQENRLAHAMLFLGKEGSGALPLALAFAKYIVCEKVNRPAI
SDAPSLFGGGESPDDGAPVKLDAACGVCAACQKAADLVHPDIHFSYPVVTRKAGTPPVST
DYITEWRSFIKAYPYGNVYDWLQFIGAENKQGNITAHECNDIIRKLNLKSFEGGYKVLVM
WLPEYLGAEGNKLLKLIEEPPAKTVFLLVAENESQILQTILSRCQLIKIPQPSDEEIRNA
LVTRNKADEETAMRVAALAEGNYREAMQILQHSDEDWQRLLRDWLNSIMKTGPVAQSKWV
EEAGQLGREGQKQFLRYFNHLLRTALRLRVIPDLAEQYPESERDFALRLNRITSIEKQQA
IIEELDKATYYIERNANGKMLFMALTIKIYHIIQHNVVFLID
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttacagatgttatcggccagcaacagttaaagacagagttgaccgaattgatg
caggaaaaccggttggcgcatgcgatgctttttctgggtaaagaaggcagcggcgcgctg
ccgcttgctttggcttttgcaaaatatattgtttgtgaaaaggtaaaccgccccgccatc
tccgacgcgccctctttgtttggcggcggcgaaagcccggatgatggagcacctgtaaaa
ttagacgccgcttgcggcgtttgtgcagcctgtcaaaaagcagccgacctggttcatccc
gatatacatttcagttatcccgtggtgacccggaaagcaggcacgccgcccgtaagcacg
gattatatcactgaatggcgttcttttattaaagcttatccctacggcaatgtgtacgac
tggctacaatttatcggggctgaaaataaacagggtaatatcactgcccacgagtgtaat
gatatcatcagaaaactcaatctgaaaagttttgagggaggctacaaggtattggtcatg
tggctgcccgagtatcttggcgccgaaggcaacaaactgttgaaactgattgaggaacca
ccggcaaaaaccgtttttctgctggtcgcggaaaatgagagccagattctgcaaactata
ctgagcaggtgccagctgatcaaaataccccaaccgtcagacgaagaaatcaggaatgct
ttagtaacgcggaataaagccgacgaagaaaccgccatgcgggtggctgcgcttgcggaa
gggaactaccgggaagcgatgcaaattttgcagcattctgatgaagactggcaaaggctg
ttgcgagactggctgaacagtatcatgaaaaccggccccgtggctcagtcaaaatgggtg
gaagaggcaggccagttggggcgcgaggggcaaaagcaatttttaagatatttcaatcac
ctgcttcgaacggcgttgcgtttgagggtcatacccgacctggcggaacaatatcccgaa
agtgaacgcgattttgcgctgcggctcaaccgcatcaccagtatagaaaagcagcaggcc
attatcgaagaattagacaaagccacttattatattgagcgaaatgccaatggcaagatg
ttgtttatggcactgaccattaaaatttatcatatcattcagcacaatgttgtatttttg
attgattga
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