Niabella insulamsoli: ABDK00_016610
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Entry
ABDK00_016610 CDS
T11434
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
nij Niabella insulamsoli
Brite
KEGG Orthology (KO) [BR:
nij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nij03400
]
ABDK00_016610
DNA repair and recombination proteins [BR:
nij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
ABDK00_016610
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
AAA
FtsK_SpoIIIE
ResIII
AAA_16
Zot
AAA_30
DUF5852
T2SSE
AAA_6
AAA_7
Motif
Other DBs
NCBI-ProteinID:
XTN41025
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Position
complement(3933369..3934913)
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AA seq
514 aa
AA seq
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MADVTKFSESVQAGYNFKGEHFKIGRAMLDGNVVEGADVFIPFKTLNRHGLIAGATGTGK
TKTLQVLAEGLSDASIPVVLMDIKGDLSGIGAAGVANEKINARSQQLGINFQPAAYPVEF
LTLSNEKGTRMRATVSEFGPILLSKILDLNDTQGGLVSMIFKYCDDNQLPLVDLKDFIKV
LQFVSNEGKAELEKDYGKIATSSTGTILRKVIELQQQGADLFFGERSFDVDDLMRISDDG
RGMISIVRVTDLQDRPKLFSTFMLQLLAELYASSPEAGDMDKPKLVLFIDEAHLIFKEAS
DALLNQIETIVKLIRSKGIGIYFCTQNPMDVPASVLSQLGLKVQHALRAFTAADRKVIKQ
TAENYPESDFYKTDELLTQVGIGEALITLLNEKGVPTPLVHCMLRAPQSRMDVLSDAELG
SIVAGSKIASHYNEVIDSQSAYEILTQKLQEAAARQQETIKQKEAAKSQRDDKGFFDNPI
VKSVARTAGNTIVRSLLGAIGISSSSRRRKKSWF
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgttacaaaattttccgaatcggtgcaggctggttataattttaaaggagag
cattttaaaatcggcagggcaatgcttgatggtaatgtggtggagggagccgatgtcttt
attccctttaaaacactcaacaggcacggcctgattgccggggcaacaggaaccggaaaa
accaaaaccttgcaggtgctggccgaagggctgagtgatgccagtattccggtagtgttg
atggatataaagggtgatttgagcggtattggagccgccggcgtggccaatgaaaaaata
aatgcgcgcagccagcagctcggcatcaattttcaacctgcggcctaccctgttgagttt
ttgacgctgagtaatgaaaaaggcacgcgcatgcgggcaaccgtaagcgaattcggcccc
attttgctttccaagattttagatctcaacgacacgcaaggtgggctggtgtctatgatt
tttaagtattgcgacgacaatcagctgccgcttgtggatctgaaagattttataaaagtg
ttgcaattcgtgagcaacgaaggaaaggcagaactggagaaagattatggaaaaattgca
acctcttctaccggtacgatccttcgaaaagtgattgaactacagcagcagggcgctgat
cttttttttggagaaagaagttttgatgtggatgatttaatgcggatcagcgacgatggc
cgcggcatgatttcgattgtccgtgtcaccgatttgcaggatcgccccaaattgttttcg
acttttatgcttcaattgctggccgaactttatgcttcaagtccggaggccggtgatatg
gataaacctaagctcgtgttgttcatcgatgaagcgcatctgatttttaaagaagccagc
gacgctttgctcaaccagatcgagacgattgtgaagctgattcgatcaaaagggatcggt
atttacttttgcacgcaaaacccgatggatgttcctgcatccgtattgtcacagctgggc
ttaaaagtgcagcacgccctgcgcgccttcaccgccgccgatagaaaagtgatcaaacaa
accgccgaaaattatcccgaaagtgatttttataaaactgatgaattgcttacgcaagtg
ggaattggagaagcgctgatcacgctgctcaatgaaaaaggagttccaacgcctttggtg
cattgcatgttgcgggcgcctcagagccgcatggacgtattaagcgacgctgaattggga
agcattgttgcaggctccaaaatcgcttcgcattacaacgaagtcatcgacagccaaagc
gcttacgaaatactcactcaaaaattacaggaagccgccgcccggcagcaagaaaccatt
aaacaaaaagaagccgccaaatcgcagcgggatgacaaaggattcttcgacaaccccatc
gtgaaaagtgtggcacgcactgccggaaacaccattgtccgctcgctacttggcgctata
ggcatcagcagtagtagccggagaagaaaaaagagttggttttaa
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