Nitrincola iocasae: F5I99_00325
Help
Entry
F5I99_00325 CDS
T06212
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
nik
Nitrincola iocasae
Pathway
nik02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F5I99_00325 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nik03000
]
F5I99_00325 (nifA)
Transcription factors [BR:
nik03000
]
Prokaryotic type
Helix-turn-helix
Other families
F5I99_00325 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
HTH_8
GAF_3
AAA_2
AAA_5
AAA
Mg_chelatase
HTH_23
Kinesin
nSTAND3
HTH_1
AAA_16
HTH_3
Microtub_bd
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QEW08434
UniProt:
A0A5J6LIM3
LinkDB
All DBs
Position
complement(62021..63535)
Genome browser
AA seq
504 aa
AA seq
DB search
MLQAILVGELETLFLVSQVLSKSLNLQETLSKVMEVLDDRVGLERGLVGLVPPDQNELVI
YALCGVPDLEAGDIRYQPGEGVVGEVMRRGSSLILHKITDDPRFLGRLGIYDTKRPFIGV
PILSGDEVLGVFAAQPSSSHRELLGERARFLEMVANLIGQSVRLSREVERERKALREERD
QLKRTVRGQFGFDNIIGHSFPMRQVFEQVRQVAKWNTTVLIRGETGTGKELIANSIHYNS
PRARGPFVKLNCAALPENLLESELFGHEKGAFTGAVSQRQGRFEQADKGTLFLDEIGEVS
AGFQAKLLRVLQEGELERVGGSRTIKINVRVVAATHRDLEADVEQGLFREDLYYRLNVMP
IFMPTLRERLEDVPDIANFLLNKIATAQERPLSITDSALRVLMHHSWPGNVRELENCLER
AAVMSEDGIIDRDQVLLTGIDEQVMGSHGGQIDLGDDNLDERERVIAALEQAGWVQAKAA
RLLGMTPRQISYRIQTLNIRVKQL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggcgattctcgtcggagagctggaaaccctgtttctggtcagccaggtgcta
tccaaatccctcaaccttcaggaaaccctcagtaaagtcatggaggtactggacgatcgg
gttgggctggaacgaggtctggttggactggtaccaccagatcagaatgaactggtcatt
tatgccctgtgtggagtaccggatctggaagccggagatatacgttaccagccaggtgaa
ggtgtcgtaggtgaagtaatgcgccgcggcagcagcctgatactccacaaaattaccgat
gatccgcgttttcttggccgtttaggcatttatgataccaaacgcccctttatcggtgtg
cctattctcagtggcgatgaagttctgggggtgttcgcagcccaacccagtagctcccac
agggaactgctgggagagcgtgcccgatttctggagatggtcgccaatttaatcggccag
agtgtacgcctgtcgcgggaggtggaacgtgagcgtaaagccctcagagaggaacgtgat
cagctcaaacgcaccgtgcgcgggcagtttggcttcgacaatatcattggccactctttc
cccatgcgtcaggtatttgaacaggtacgccaggtcgctaaatggaacaccacggtgttg
attcgtggcgaaactggtaccggaaaggaactgattgccaattccatccattacaattcc
cccagggccagaggaccatttgttaagctcaattgcgccgctttaccggaaaacctgctg
gaatcggaactgttcgggcatgagaagggtgcctttaccggtgcggtaagccaacgccag
gggcgctttgagcaggccgacaagggcacactgtttctggatgagattggcgaagtctcg
gccggattccaggccaagctgctgcgcgtgttacaggaaggtgaactcgagcgtgtgggt
ggatcgcgcacgattaaaatcaatgttcgcgtggtagcggcaacccacagggatctggag
gctgatgtggagcaggggctgttccgtgaagacctttactaccgtcttaatgtcatgcct
attttcatgccgacgctgcgcgaacgcctggaagatgtgcccgatatcgccaatttctta
ctcaacaagatagccaccgctcaggaacgcccactcagcatcaccgacagcgccctgcgg
gtgctgatgcatcatagctggccaggtaatgtacgcgagctggaaaactgcctggaacgc
gccgcggtgatgtcagaggatggcatcatcgaccgtgatcaggtattgctgaccggaatc
gatgagcaggtcatgggcagtcatggcgggcagatcgacctgggggatgacaatctggat
gagcgtgaacgggtgatagccgcactggaacaggctggctgggtccaggccaaggcggcc
cgcttactgggcatgacaccacgtcagatctcctatcgtatccagacgctcaatattcgg
gtcaagcaactctaa
DBGET
integrated database retrieval system
