Nitrincola iocasae: F5I99_00690
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Entry
F5I99_00690 CDS
T06212
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
nik
Nitrincola iocasae
Pathway
nik03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F5I99_00690 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nik03400
]
F5I99_00690 (xth)
Enzymes [BR:
nik01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
F5I99_00690 (xth)
DNA repair and recombination proteins [BR:
nik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
F5I99_00690 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QEW05133
UniProt:
A0A5J6L9D0
LinkDB
All DBs
Position
137377..138150
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AA seq
257 aa
AA seq
DB search
MRVISFNTEGIEQAADKGFFDWMVKQDADVVCLQSLRAKEYQLDADRYHPEGYHAYFFDA
FEDGFSGVAIYTRHVPKAIMTGLGFEQCDFNGRFIQADFDKFSISSLTIPSGLKSDQDQA
AKMEYLDLFMGHLKKTLRKRRDFIFTGTFNIAHKPIDLSNWYVNQRVSGFLAEERIWIEE
MFGDLGFVDALRQVNKADRQYTWWPDYNRAWKLNEGARLDYQITTPNLRKTIKDVSIYKD
QRFSGHAPLIIDYDLDF
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatttctttcaatactgaaggtattgaacaagccgctgacaaaggattcttt
gattggatggttaaacaggatgcggacgtggtttgtctgcaaagcctccgtgcaaaagag
tatcagctggatgcagatcgctaccaccccgaaggctaccatgcctacttttttgatgcc
tttgaagatggttttagtggcgtggccatttacacccggcatgtgcctaaagctatcatg
actggattgggttttgaacagtgtgattttaatggtcgctttattcaagccgattttgac
aagttcagtatttcttcgctgacgattccatctgggctcaaaagtgatcaggaccaggct
gccaagatggagtacctggacctgtttatgggacacctgaaaaaaaccttacgaaagcgc
cgagattttattttcactggtacttttaacattgcccataagccaatagatctgagcaat
tggtatgttaatcagcgtgtatcaggttttctggccgaagagcgaatctggattgaagag
atgtttggtgatctgggctttgtcgatgctttgcgccaggtaaacaaagcggatcggcaa
tatacctggtggcctgattacaatcgtgcctggaagctgaacgaaggcgcgcggttggat
tatcagataaccacgcctaatttgcgtaaaacgattaaggacgtatctatttataaagat
cagcgcttctctggccatgccccgctgattatcgattacgatctggatttttga
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