Nitrincola iocasae: F5I99_00770
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Entry
F5I99_00770 CDS
T06212
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
nik
Nitrincola iocasae
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nik03000
]
F5I99_00770
Transcription factors [BR:
nik03000
]
Prokaryotic type
Helix-turn-helix
LysR family
F5I99_00770
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QEW05147
UniProt:
A0A5J6L9G3
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Position
158446..159360
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AA seq
304 aa
AA seq
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MQPSMRQLKAFVAITEFGSFIEASERLHMSQPALSIAIRKLEESVGGTLLNRSPRGVQLT
PEGKFFLPTARRLIGDWDEALGDLGELFNKQRGKVTLAALPTLAAGFLPAVLSDYRQRYP
NISISVHDVLASQVDDLVSDHRADIGLSVQPPRAEATHFEPLVEDHFVAVCPLGHPLLER
QEVRWDQLLRYPIIAVSRLSSTRNAIEGVLRALHMEMDLMCEVSQIGTAGRMVAAGLGVA
ALPSLSFRQISSEGVGWRSLTAPYVPRSLGIITPSRGLHSAAATAMLDLIREHSYSLDEL
SKLE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccttccatgcgacaactcaaagccttcgtcgccatcaccgagtttggtagcttt
attgaggcgtctgagcgtctgcacatgtcgcagcctgcgctaagtattgctattcgaaaa
ttggaagagtcggtgggaggcacgcttctcaatcggtctcccagaggcgtacagctcact
ccagagggtaagttttttttaccgacggctagacggttgatcggagattgggatgaggcc
ttgggtgatcttggtgagcttttcaataagcagcgaggcaaagtaacactcgcggcactg
cctacactggcggctggttttctaccagccgtactgtcggattatcgccaacgctacccc
aatatttcaattagtgttcatgatgtgctggcttcacaagtggatgatttagtcagcgac
catcgtgcggatattggtctttcagtccaaccgcctcgtgctgaggcaactcattttgaa
cccttggttgaagaccatttcgtcgctgtttgtcctcttgggcatccgttacttgagcgg
caagaggttcgttgggatcagttgttgcgctaccctatcattgcggtgagccgactttcg
agtacacggaacgccatcgaaggtgtattgcgagcgctgcacatggagatggatctaatg
tgtgaggttagtcaaattggtacagcaggacgaatggttgcggcagggttaggtgttgcc
gcgcttccatcccttagctttcgtcaaatctcttcggaaggtgtgggttggcggtcatta
acagccccctatgtgccacggtcattgggtattatcaccccctcccgtggcttgcattca
gcggcagcgaccgcgatgctggatctaatacgggagcactcctactcacttgatgagtta
tccaaacttgagtag
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