KEGG   Nitrincola iocasae: F5I99_00855
Entry
F5I99_00855       CDS       T06212                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
nik  Nitrincola iocasae
Pathway
nik02020  Two-component system
Brite
KEGG Orthology (KO) [BR:nik00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    F5I99_00855
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:nik02022]
    F5I99_00855
Two-component system [BR:nik02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   F5I99_00855
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 HTH_50 AAA_16 AAA FleQ ResIII
Other DBs
NCBI-ProteinID: QEW05163
UniProt: A0A5J6L9F3
LinkDB
Position
178559..179926
AA seq 455 aa
MTEDQGASPVLLIDDEKHIRLAAGQTLELAGYAVTLMENAEGVIPAMDENWPGVVITDIN
MPGMDGLELMQSIHAKDPDLPVILITGHGDISMAVNAIRQGAYDFIEKPFASEFLLDVVR
RALDKRRLTLENRQLRIELEAQSAPGPKIIGKSQQIQQLRRLLAAIADTAADILVMAETG
CGKDLLARFIHEHSQRRDKNFVAINCGAVPEALIESELFGHEAGAFTDARSKRIGKFEYA
NGGTLFLDEIESMPVALQIRLLRVLEERSIERLGSNQTIDLNLRVIAATKVDLLDLCERG
GFREDLYYRLNVLRVDIPPLRERREDIPLLFQHFALVASNQYGREVMPLPAERMHSLMLH
DWPGNVRELRNLAERYILLGESCTFDFDNRPITVDLPGLGMTLPEQVERFEKMLIHTELG
RHGGSIKDTLESLGLPRKTLYDKMRKYGLDKSHYK
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgaccgaagatcaaggcgctagcccggtattgttgatagatgacgaaaagcatattcgt
ctggccgctggtcaaacactggagctggcagggtatgccgtgacattgatggaaaatgcc
gagggtgtgatcccggcaatggatgagaactggcccggcgtagtgattaccgatattaat
atgcccggtatggatggcctggagctgatgcaaagtattcatgccaaggacccggatctg
cctgttatattgattaccggccatggcgatatttctatggctgttaatgctatacgccag
ggagcttatgattttattgaaaagccttttgcatcggagttccttctggatgtagtccgg
cgcgccctggataaacgccgtttgacgttggaaaacaggcaactgcgtattgagcttgaa
gcacaaagcgcacccggacccaaaattattggtaagtcacagcagatccagcagttgcgg
cgcttattggctgccattgctgatactgcagccgatattctggtgatggctgaaaccggc
tgtggtaaggacttgttggcgcggtttattcatgaacacagtcaacgccgggataaaaac
tttgttgctattaactgtggtgcggtgccggaagcgctgattgaaagtgagctgttcgga
catgaggcgggtgcctttaccgatgccagaagtaagcgtatcggcaagtttgaatacgct
aacggtggtaccttgtttctggacgaaatcgaaagtatgcctgtggcactgcagattcgg
ttgttgcgggtgttggaagagcgcagtattgaacgcctgggctctaatcagaccatcgat
ttgaatctccgtgtaatcgctgccactaaggtggacctgctggatttgtgtgaacgcggt
ggctttcgtgaagatctgtattaccgtctgaatgtattgcgtgtggatatccccccattg
cgcgaacgacgtgaagacattccgttgctgttccagcattttgccctggtagcgtctaat
cagtacggacgtgaagtcatgcctctgccggctgagcgtatgcatagcctgatgttgcac
gactggccaggaaatgttcgcgagctgcgtaatctggctgagcgctacattcttctgggg
gagagttgcacctttgattttgataaccggccaatcactgtagatttgccggggctaggg
atgacgttgcctgaacaggtggagcgatttgaaaaaatgttgatccatactgagttaggc
cgacatggcggatctatcaaggatacgttggaatctcttgggctaccgcgcaaaaccctg
tacgacaaaatgcgtaaatatggtttggataaaagccactataaataa

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