Nitrincola iocasae: F5I99_01935
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Entry
F5I99_01935 CDS
T06212
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
nik
Nitrincola iocasae
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
nik03110
]
F5I99_01935 (clpB)
Chaperones and folding catalysts [BR:
nik03110
]
Heat shock proteins
HSP100
F5I99_01935 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_14
AAA_24
nSTAND3
Mg_chelatase
ATPase_2
TniB
AAA_18
IstB_IS21
bpMoxR
AAA_7
DUF815
NBD_SMAX1
NACHT
AAA_19
ABC_tran
DNA_pol3_delta2
Exonuc_VII_S
Peptidase_S64
Motif
Other DBs
NCBI-ProteinID:
QEW05351
UniProt:
A0A5J6LAF1
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Position
390621..393197
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AA seq
858 aa
AA seq
DB search
MSPDKFTSKLNDALAKAQSLAVGKDHNFIEPIHLLAAFIEQRDGSVRPLLGQAGAQMPLL
SRKIGEALDRLPQVKDPDGEIRLSQNMARLFNLTDKLAQKRGDQYVASELMLLSMVDDKT
DAGRVLKEVGVTREKLTEVINNIRGGAAVTDPNVEESRQALDKYCVDLTERAENGKLDPV
IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSL
DMGSLIAGAKFRGEFEERLKAVLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLK
PALARGELHCVGATTLDEYRQYVEKDAALERRFQKVIVDEPSEEDTIAILRGLKERYEIH
HSVDITDSAIVAAAKLSQRYITDRQLPDKAIDLIDEAASRIRMEMDSKPESMDRLERRLI
QLKMEREALKKEKDDASQKRLSELQQTISKLEKEYSDLDEIWKAEKASLQGSQNVKEKLD
QARVEMEQARRAGDLTKMAELQYGRIPELEKQLQAADTAEQDVQETKLLRNKVTEEEVAE
VVSRWTGIPVNKMLEGERDKLLRMEDALHQRVVGQSEAVVAVANAVRRSRAGLADPARPS
GSFLFLGPTGVGKTELCKALAHFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEE
GGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTIVVMTS
NLGSDLIQGYSGDDDYSLMKKAVMEVVGMHFRPEVINRIDELVVFHSLRKDQVAGIANIQ
LERLRKRLAERDLRLTLTPTALEKLVDVGFEPVYGARPLKRAIQQWIENPLAQKLLAGDY
LPGSEISVDVEAGEFTFH
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctgataaattcacctcgaaattaaatgacgccctggctaaagcccagtcactg
gcggttggtaaagaccataactttatagaaccgattcacctgctcgcggcattcatcgaa
cagcgcgatggctccgtgcgccctttgctggggcaagccggtgcgcaaatgccactgctg
agccgcaaaatcggtgaagccctggatcgcttaccccaggtcaaagacccggatggtgaa
attcgactgtcgcagaatatggcgcggctgttcaacctgaccgataaactggcgcagaag
cgcggtgaccagtacgttgccagcgaactgatgctgctgtcgatggtcgacgacaaaacc
gatgccgggcgagtgcttaaagaagtgggtgttacccgtgaaaaactcaccgaagtgatc
aataacatacgtggcggtgccgcggtaactgatcccaatgtggaagaatcacgtcaggcg
ctggataaatactgcgtcgatctcaccgaacgtgctgaaaacggcaaacttgatccggtc
atcggccgtgatgaagagatccgccgtactatccaggtactgcagcgccgtaccaaaaac
aacccggtattgatcggcgaacccggtgtgggtaaaaccgccattgtcgaaggactggcg
cagcgcattatcaatggcgaggtgccggaagggctcaaacacaaacgtgtcttgtcgctg
gatatgggctcgttgatcgccggagccaagttccggggtgaatttgaagaacgcctgaaa
gcggtgctgaatgaactgtcgaaacaggaaggccagatcattctgtttattgatgaactg
cacaccatggtcggcgccggtaaaggcgaaggctccatggatgccgggaatatgctcaag
cctgcgctggcacgcggcgaactccactgtgtcggtgctaccacgctggatgagtaccgc
cagtatgtggaaaaagatgccgcgctggagcggcgtttccagaaagtcatcgtcgatgaa
cccagcgaagaagataccatcgccattctgcgtggcctaaaagagcgctatgagattcac
catagtgtcgatatcaccgattccgccatcgtcgctgccgccaagctgagtcagcgctat
attaccgaccgtcagctaccggataaagccatcgacctgatcgacgaagccgcctcacgc
atccgtatggaaatggattccaaacccgaatccatggaccgtctggagcgtcgactgatc
cagctgaaaatggagcgtgaagcgctgaaaaaagagaaagatgacgcctcgcaaaagcgc
ctgagtgaactgcagcaaaccatcagtaaactggaaaaagaatactccgatctggatgaa
atctggaaggccgaaaaagccagtctgcaaggctcacaaaacgttaaagaaaaactcgat
caggcccgtgtggaaatggaacaggcgcgccgggccggtgacctgacgaaaatggccgag
ctacagtatggccgcatccctgagctggaaaaacagcttcaggctgccgatacagccgaa
caggatgtgcaggaaaccaaactgctgcgcaataaagtcaccgaagaggaggtggccgaa
gttgtatcgcgctggaccggtattccggttaacaaaatgctcgaaggcgagcgcgacaaa
ctgctgcgcatggaagacgccctgcaccagcgcgtagtcggacagagcgaagccgtcgtg
gcagtcgctaacgccgtacgccgttcgcgtgccggtctggctgaccccgcccgacccagc
ggcagcttcctgttcctcggcccaaccggtgtgggtaaaaccgagctctgcaaagccctg
gcacacttcctgttcgacacagaagaagccatggtgcgcatcgatatgtccgagttcatg
gagaaacactccgtcgcccgactgatcggtgcccctccgggctatgtcggctatgaagag
ggtggctacctcaccgaagccgtgcggcgtaaaccctactccgtactgctgctggacgaa
gtggaaaaagcccacccggatgtcttcaacatcctgttgcaggtactggaagatggccgc
ctgaccgatggccagggtcgcaccgtcgacttccgtaacaccatcgtggtgatgacctct
aatctgggatctgacctgatacagggttacagtggcgatgatgactacagcctgatgaaa
aaagcggtaatggaagtcgttggtatgcacttcagacccgaagtgatcaaccgtatcgac
gaactggtggtattccacagcctgcgcaaagaccaggtggccggtatcgccaatatccag
ctggaacgcctgcgcaaacgcctggccgaacgcgacctgcgcctgaccctgacacccacc
gccctggaaaaactggtggatgtcggcttcgaacccgtctacggcgcacgcccattgaaa
cgcgccatccagcagtggatcgaaaacccgctggcacaaaaactcctggcgggtgactac
ctgcccggtagcgaaatcagcgtagatgtcgaagcgggcgaattcaccttccactaa
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