Nitrincola iocasae: F5I99_02615
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Entry
F5I99_02615 CDS
T06212
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
nik
Nitrincola iocasae
Pathway
nik02020
Two-component system
nik02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F5I99_02615
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F5I99_02615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nik03021
]
F5I99_02615
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nik02035
]
F5I99_02615
Transcription machinery [BR:
nik03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F5I99_02615
Bacterial motility proteins [BR:
nik02035
]
Flagellar system
Flagellar assembly proteins
Stator
F5I99_02615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Asparaginase_2
DUF742
GerE
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
QEW05475
UniProt:
A0A5J6LAE7
LinkDB
All DBs
Position
553225..553935
Genome browser
AA seq
236 aa
AA seq
DB search
MYNQLQFKTSNELLEQYSPLVKRIAQHLLARLPSSVVLDDLVQAGMIGLLEASRKFDPGK
GASFETYAGIRIRGSIIDEVRRGDWTPRSVHRNGRRVSEAIRVVELRTGRDASDADVAAE
LDITVAAYHALLQDSLDSRLFSIDELSHDEDDSVGMQFEGDDPGPDESFQSASFRQALAD
AIGTLPEREKLVMALYYDEELNLKEIGSVLGVSESRVSQIHTQAALRLRGRLRDWQ
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtataaccagcttcaatttaaaaccagtaatgagctgctggaacaatatagcccgttg
gtgaagcgcattgcccagcatcttctggccaggttgccatccagtgttgtgctggatgat
ttggtgcaggctggtatgatcggtttgctggaagcctcaagaaaatttgatccgggtaaa
ggggcgagttttgaaacctatgccggtatccgcattcgaggatctattattgatgaggtt
cgtcgtggtgactggacgccgcgatcggttcatcgcaacggacgccgtgtcagtgaggct
attcgggttgtagagttacgaaccgggcgggacgcatcggatgctgatgtggcagcagag
ctggatataaccgttgctgcttatcatgctttattgcaggattcactggatagtcgactt
tttagtattgatgagctgagtcatgatgaagacgattcagtggggatgcagtttgaaggt
gatgatcctggaccggatgagtcatttcagagtgcgtcatttcgtcaggcacttgccgac
gctatcggtacattgcctgaacgtgaaaaactggtcatggcgctctactatgatgaagaa
cttaatttgaaagagattggtagtgttctgggtgtcagtgagtcaagggtcagtcagata
catacccaagccgcactgcggttaagggggcggttacgtgattggcagtga
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