Nitrincola iocasae: F5I99_03030
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Entry
F5I99_03030 CDS
T06212
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
nik
Nitrincola iocasae
Pathway
nik03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
F5I99_03030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nik03019
]
F5I99_03030
03009 Ribosome biogenesis [BR:
nik03009
]
F5I99_03030
03036 Chromosome and associated proteins [BR:
nik03036
]
F5I99_03030
Enzymes [BR:
nik01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
F5I99_03030
Messenger RNA biogenesis [BR:
nik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F5I99_03030
Ribosome biogenesis [BR:
nik03009
]
Eukaryotic type
90S particles
RNase
F5I99_03030
Prokaryotic type
rRNA processing factors
F5I99_03030
Chromosome and associated proteins [BR:
nik03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
F5I99_03030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Phage_P2_GpU
Motif
Other DBs
NCBI-ProteinID:
QEW05543
UniProt:
A0A5J6LAJ2
LinkDB
All DBs
Position
647953..648642
Genome browser
AA seq
229 aa
AA seq
DB search
MKKPVEELARRLGHKFADESLFELALTHRSCGKRNNERLEFLGDSVLNFVVAADLYRRFP
SAREGQLSRLRAMMVKGETLAEIARELGLGDYLRLGSGELKSGGFRRDSILADAVEAIIG
AIYRDAGLATAESYVLQWYEKRLDELDLDGSIKDSKTRLQEFLQSRRLDLPDYELVSVEG
EAHAQTFNIHCHIALLSNPTEGQGNSRRQAEQNAAKAALAQLKQENRRD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaacctgtagaagagctggcccggcgcttagggcataagtttgctgacgagtct
ttgtttgagttagcgctgactcatcgcagttgtggaaagcgtaataacgagcgcttggag
tttttgggagactcagtgttgaactttgtcgtcgctgcggatctctatcggcgctttcct
tcggctcgcgaaggacagttaagtcgtcttcgcgcaatgatggtgaaaggagaaactctg
gctgaaattgcccgtgaacttgggttaggtgattatttgcgtttgggttccggagagctt
aaaagcggcggcttccgacgtgactccatcctggctgatgctgtggaggctattatcggt
gctatttaccgtgatgcgggtctggctactgcagaatcttatgtactccagtggtatgaa
aagcgcttagatgagttggatctggatggctcaatcaaggactcgaaaacacgcttgcag
gagtttttgcagtcccgtcgtctggatttgccggactatgaattggtgagtgttgaaggt
gaagcacatgcacaaactttcaatatacattgccatattgccttgttaagcaatccaact
gaagggcaaggcaatagccgccgtcaagccgaacagaatgctgccaaagcggctctggcg
cagttgaaacaggagaatcgtcgtgactga
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