Nitrincola iocasae: F5I99_03735
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Entry
F5I99_03735 CDS
T06212
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
nik
Nitrincola iocasae
Pathway
nik02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F5I99_03735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nik03021
]
F5I99_03735
Transcription machinery [BR:
nik03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F5I99_03735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Sigma70_r2
PCI
HTH_23
HTH_11
HTH_24
PhyR_sigma-like
HTH_38
HTH_3
HTH_28
HTH_40
HTH_SB
HTH_VMAP-M9
TnsD
HTH_36
Fe_dep_repress
GerE
HTH_Tnp_ISL3
DUF722
HTH_7
Imm8
HTH_10
Phage_terminase
HTH_Mga
Rv2175c_wHTH
HTH_31
MarR
HTH_Tnp_4
HTH_PLP
DUF2774
Motif
Other DBs
NCBI-ProteinID:
QEW05670
UniProt:
A0A5J6LAZ7
LinkDB
All DBs
Position
771220..771732
Genome browser
AA seq
170 aa
AA seq
DB search
MTAISTQHAEQVEKLYLENRTWLSIFIQRRLGCPDDTADLIHDTYMRILTCGYLPQKHES
KRFLTHIAKGLLIDSYRRQQVKKAYEQYLQQLPEQYVPSAEEHVLMLESLVSIDALLHRL
PDKVREALLLRQLDNLSYKEIAKRLNVSVSSVEKYVAKALQACMADIIQD
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgacggctattagtacacagcatgcggaacaggttgaaaaattgtatcttgaaaaccgt
acttggctgtctatctttatccagcggcgtcttgggtgcccggatgatacggcagactta
atacacgatacctatatgcgtattctgacttgtggctatctaccccagaaacatgagtca
aaacgctttttaacgcacattgccaaaggcttgttgattgatagctatcgtcggcagcag
gttaaaaaagcttatgaacagtatctgcaacaattgccggaacagtatgtgccatcggct
gaagagcatgtactgatgcttgaatcgcttgtcagtatcgatgcgctgctgcaccgcttg
cctgataaagtgcgtgaggccttattgttacggcagttggataatctcagttataaagaa
attgcaaaacgtttgaatgtatcggtttcttctgtagaaaaatatgtggctaaagcgctg
caggcctgtatggccgatattattcaggattaa
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