Nitrincola iocasae: F5I99_03865
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Entry
F5I99_03865 CDS
T06212
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
nik
Nitrincola iocasae
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nik03032
]
F5I99_03865 (ihfB)
03036 Chromosome and associated proteins [BR:
nik03036
]
F5I99_03865 (ihfB)
03400 DNA repair and recombination proteins [BR:
nik03400
]
F5I99_03865 (ihfB)
DNA replication proteins [BR:
nik03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
F5I99_03865 (ihfB)
Chromosome and associated proteins [BR:
nik03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
F5I99_03865 (ihfB)
DNA repair and recombination proteins [BR:
nik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
F5I99_03865 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
ThiS
HU-CCDC81_euk_1
Ub-RnfH
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
QEW05692
UniProt:
A0A5J6LBW3
LinkDB
All DBs
Position
802391..802684
Genome browser
AA seq
97 aa
AA seq
DB search
MTKSELIERLIEQHPQLSVKDVELAVKTMLDHMTEALSDGDRIEIRGFGSFSLHYRAPRI
GRNPKTGEAVSLDAKYVPHFKPGKEMRDQVNSSMNAS
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcagagcttattgaacgcctgatagagcagcacccgcaattatcagttaag
gatgtggaattggccgtgaagaccatgctcgatcacatgaccgaagctttatccgatggt
gatagaatcgagattcgcggttttggcagcttttcgctgcattaccgcgccccgcgtatt
ggacgcaatcctaaaacaggcgaggcggtttcgctcgatgcgaaatatgtgcctcatttc
aaacccgggaaagagatgcgggatcaggtaaacagcagtatgaatgccagctga
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