KEGG   Nitrincola iocasae: F5I99_03930
Entry
F5I99_03930       CDS       T06212                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
nik  Nitrincola iocasae
Pathway
nik03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nik00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    F5I99_03930 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nik02044]
    F5I99_03930 (tssM)
Secretion system [BR:nik02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   F5I99_03930 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: QEW05703
UniProt: A0A5J6LAX7
LinkDB
Position
816818..820300
AA seq 1160 aa
MRMFLGIFKNLGGLLGLIALLLLAAIIWFVLPALSMGNSNPFQSALARGGMIFTLFAVAL
VYKARTWVLARKRNDQLGQGVVKSSEDGTNDKADKANETEFKTKFEDAVRLLKRQKGPGA
GGNYLYTLPWYMLIGPPGSGKTTALINSGLHFPLLDQFGASIRGVGGTKNCDWWFTDQAI
LVDTAGRFTTQDNQQERDKKDWNTFLSLLAKYRKRKPINGIVVAYSIEDLVRKDEADIVS
DALLIKKRIYELYEKLKIEFPVYLVFTKLDLLPGFEEFFGHLDSEGREQVWGTTFKIADQ
QDDPVSRYLVEHKLLTERLQLKVLDGLKNEVDLTKRDSIYLFPRMMASLQDRISLLLDTS
FKPTRFETDLMLRGVYFTSGIQDGSVLDKVISGLSAHLGRARGADGRQGKSYFIKNLLND
VVFKEAGLAGHNARFEKIRSMLYLGSYVALLAACIGITAFWYHSFTQNTQQLKQFNDAIA
EVEAQRQTVQESDHDIKHVLPILNTSRDIPFGHGRWNAEGPVMSGFGLNQAGKMHAESVR
LYERSLLNLLLPRLVFHTEERLLQQEEGLFDDLKFYQVLGGQLEIDQAFVSRYIQARFRH
YDIDSRNTLEDHVKQLIDLLPAHYYPSLNPELVQLAQRSLLQQPVSLRLLAQIESQAASD
SISQGYSLLDLVGNNGVLIFAVEGKSLQEVLIAGLYTRIGAQRYFAQQSGFLDRLLEEDA
SILGYDQSLAERYKAELFRQYLQKYQQVWLDTLHAIHLDNIDDVQAKARAIDVLISESSP
IKQLLGLVRANTEFSTIFTSVSEAANPANNQQGTPAMAVLSDDYMELMSLEVLPMFAQIN
RFALSTDADEPERLSALFSQLDALKIFLQGLQHSVNSERSAWMRASSHQGMGEVVAQLEM
EIATLPKPLSTWIAQLLDSAKAETGSQARSYIQNQWASNVVPACRDMIAGRYPFAADASR
EITLRDLASYFAGGGIVDGYFETYLSPYVDRSHSPWRWQQVTGFESAGVNRLLRQVELSN
RIQNMFFGPRGDTPSLSFELVPRDVDPEILKITLVIDNEELSYAHGPKLGRRFDWPSSNL
STQSFSRLVIEMADETEAITEQGDWSLFRLFDQGHMKRIDSERYLIEFSTRSGHRFNFEL
VAGSVYNPFDANLFKSIRCN
NT seq 3483 nt   +upstreamnt  +downstreamnt
atgaggatgtttctgggaatctttaaaaatctaggtgggctactgggcttgattgccttg
ctgttattggcggctattatctggttcgtactaccggctttgtctatgggcaatagcaac
cccttccagtcggcgctagctcgcggaggtatgatttttaccctgtttgcagtggcactg
gtttataaagccagaacctgggtgctggccagaaaacgcaatgatcaactgggccaggga
gtggtgaaatcctccgaggatgggacgaacgacaaagctgataaagccaatgaaaccgaa
ttcaaaaccaagtttgaagatgcggtccggctactgaaaagacaaaaagggccgggagcc
ggtggaaactatctgtataccctgccgtggtatatgttgatcggcccacctggatcggga
aaaaccacggcgctgatcaattcggggctgcattttccgttgctggatcagtttggtgca
tcgatacgaggtgtcggtggcaccaaaaactgtgactggtggtttaccgatcaagctatt
ctggtggatactgccggtcgcttcaccacgcaggataatcaacaggaaagagacaagaaa
gattggaatacctttctgtctctgttggccaagtatcgcaagcgtaagccaattaatggc
atcgttgtggcctacagcattgaagatctggtacgtaaagacgaagctgatattgtttct
gatgccttgttgatcaaaaaacggatatacgaactctatgagaagttaaaaatagagttt
cccgtatacctggtatttaccaaactggatctgcttcctggttttgaagagttttttggc
cacctggacagcgaagggcgagagcaggtttgggggacaacattcaaaatagcagatcaa
caggatgatccggtcagtcgttatctggtggaacataaactcctgaccgaacgtttgcag
ctcaaggtacttgatggccttaaaaacgaagtcgatctgaccaagcgtgacagtatttat
ctgtttccgcgcatgatggcctctttgcaggatcgtatcagtctgctcctggataccagt
ttcaagccaacacggttcgaaacggacctgatgttacgcggcgtctacttcaccagtggt
atacaagatggatcggttctggataaagtgatcagcggtctgtccgcccatcttgggcgc
gcccgcggcgctgatgggcgacagggcaaaagctacttcattaaaaatctacttaacgac
gtggtattcaaagaagcgggactggctggtcataatgcccggttcgaaaaaattcgctcg
atgctctaccttggcagctatgtggcgttattggctgcctgcattggtattaccgctttt
tggtatcacagttttacgcaaaacactcagcaactgaagcagttcaatgatgctattgct
gaagtggaagcgcagcgccaaaccgtccaggaatcggatcatgacatcaaacatgtcctg
cccatactgaatacatcacgggacattccgtttggtcatgggcgctggaacgcagagggt
ccggtaatgtcaggctttggcttgaatcaggccggtaagatgcatgcggagtccgttcgg
ttatatgaacgctccctgttgaacctgctgttacctaggttggtctttcacactgaagag
cgactgctgcagcaggaagaggggctgtttgacgacctaaaattttatcaggtattgggt
ggacaacttgaaatagatcaggcgtttgtcagtcggtatatccaggcccgttttcgtcac
tacgatatcgactctcgcaacacattagaggatcacgtcaaacagttgatcgatctattg
ccagcgcattattacccatcgttgaatcccgagttggttcagcttgctcagcgaagcctg
ctgcaacaacccgtatccttaagattgttggcgcagattgagtcacaagccgccagtgac
tccatcagtcaaggctatagtttgctggatctggtgggaaataacggtgtgctgatcttt
gctgttgaaggcaaaagcctgcaggaggttctgattgcaggcctttatacccgtatcgga
gcgcagcgctattttgcgcaacagtcaggttttctggatagattgctggaagaagatgcc
agtattttaggctatgatcagtccctggccgagcgttataaagccgagctcttcaggcag
tatctacagaaatatcagcaagtctggctggatactctgcatgcaattcatctggataat
attgatgatgtacaggcaaaagcccgtgccatcgatgtattgatcagtgagtcctctccc
atcaagcaattgcttggtcttgtcagggcaaatacggaattctcaaccatttttacctct
gtgagtgaagcggccaacccagcaaataatcagcagggaacccctgccatggccgtgctc
agcgatgactatatggaacttatgtcgctggaagtactgccgatgtttgcccagattaac
cgttttgccctttctaccgatgcggatgagcccgagcggctttctgcattattttcgcag
ttggatgcgttaaaaatcttcctgcagggattacagcattcagttaattctgaacgctca
gcctggatgcgtgccagcagtcatcaaggcatgggcgaagtggtagctcaattggaaatg
gaaattgccactttacccaagccgctgtcaacctggattgctcagttgctggactcagcc
aaagcagaaaccggttctcaggcacgcagttatatccaaaatcaatgggccagtaatgtg
gtaccggcctgtcgcgacatgattgcaggccgttatccctttgcggccgatgccagccga
gaaattaccctgagagatctggcgagttattttgctggcggtggcattgttgatgggtat
tttgagacctatttgtctccctatgtcgaccgctctcattctccttggcgttggcagcag
gtaaccggctttgagtcagccggagtgaaccggttgctccggcaggtcgagctgagcaat
cgcattcaaaatatgttttttgggccacgaggtgataccccgtcgctaagttttgagttg
gttccacgggatgttgatccggaaatactcaagattaccctggtgatcgacaatgaagag
ttgagttatgcacatggtcccaagttggggcgtcgttttgactggccgtcatcgaacttg
tctactcagtcgttttcacgcctggttattgagatggccgatgagacagaagccattact
gagcagggggactggtcattgttcaggctgtttgatcagggacatatgaagcgcattgac
agtgaacgttacttgatagagttctctacccgctcaggtcatcgttttaattttgagctg
gttgcaggcagtgtctataacccgtttgacgccaatctgttcaagtccatcaggtgcaat
taa

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