Nitrincola iocasae: F5I99_04295
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Entry
F5I99_04295 CDS
T06212
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
nik
Nitrincola iocasae
Pathway
nik00470
D-Amino acid metabolism
nik00550
Peptidoglycan biosynthesis
nik01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F5I99_04295
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F5I99_04295
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nik01011
]
F5I99_04295
Enzymes [BR:
nik01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
F5I99_04295
Peptidoglycan biosynthesis and degradation proteins [BR:
nik01011
]
Precursor biosynthesis
Amino acid ligase
F5I99_04295
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
QEW05770
UniProt:
A0A5J6LBC5
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All DBs
Position
904091..905443
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AA seq
450 aa
AA seq
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MSMIATDTLRIIIGLGQTGYACARYMAAKGWPFAVVDTREKPPLAADFYNEFPQIKLYTG
ELDPEFLASADELILSPGVAKSSAAIEYAIQQGCRVIGDIDLFCREVSAPIVAITGSNAK
STVTTLVGKMAEAAGINVAVGGNIGTPVLDLLQQPAAELYVLELSSFQLETTHELKAIAA
TVLNISPDHLDRYTDMQGYYLAKHRIYRGCRHCIVNRDDPLTVPLMVQGMKQTSFGLSAP
DLGQYGIALEADQPWLFQGLQPLMPVADLKVQGEHNVVNVLAALSLGAAAGLPLEAMLQA
AKKFQGLRHRCQWVAEKQGVGYINDSKGTNVGATLAAVQGLGSVLGDEHKLLIILGGVGK
EQNFAELKAPLARFARQVLLIGRDAGLIAGDLQGLPLQYAESLENAVTLAAELAQPGDQV
LLSPACASFDMFRGYEARGDRFIELVEGLV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaatgatagcaacggatacactgcgcattattatcggtctgggacagaccgggtat
gcctgtgcccgttatatggcggccaaaggctggccgtttgctgtcgttgatacgcgtgaa
aaaccgccattggcggcagatttttataatgagttcccccaaataaagttgtatacgggt
gagctggatcctgagtttctagccagcgctgacgaattgatccttagcccgggtgtggcc
aaatcatcagctgcaatagagtacgctatacagcagggctgccgggtgattggtgatatc
gatctcttttgtagagaggtatcagcacctatcgtggcgatcaccgggtctaatgccaag
agtactgttactacgctggtcggtaagatggctgaagcggccggtatcaatgtggccgtg
ggcggtaatatcggcacgccggtactggatctgcttcagcagcctgccgctgaactctat
gtgttggagttgtccagttttcaactggaaaccacgcatgaactcaaagccattgctgcc
acagtgttgaatatcagtccagatcatcttgaccgttatacggatatgcaaggctactat
ctggccaagcaccgtatttatcgaggctgtcgccattgtatcgtgaatcgcgatgatccc
ttgactgttccgctaatggttcaagggatgaagcagaccagcttcggcctgtcagcccct
gatctgggacagtacggtattgcactagaagccgatcaaccctggctattccagggatta
cagccgttgatgccagtggctgatctgaaagtgcagggtgagcataacgtagttaatgtc
ctggctgcgctaagtttgggtgcagcagcaggtctgccactggaggctatgttgcaggcc
gctaaaaagttccaagggctcagacatcgctgccaatgggtggccgagaagcagggtgtt
ggttatatcaatgactccaagggtaccaacgtgggtgctacgctggcggctgtgcagggg
ctggggtcagtgttgggcgatgaacataaattacttattattctgggtggtgtgggtaaa
gagcagaactttgctgagctcaaagcaccgttggcgcgctttgctcgtcaggtactgctg
ataggtcgtgatgcaggtctcattgccggtgatttgcagggcttaccgcttcagtacgca
gaatctctggagaacgccgttacgctggcggccgaactcgcgcagccgggtgatcaggtg
ctgttatctccggcttgtgccagttttgatatgtttagaggttatgaagcacgtggtgat
cgttttattgagctagtggagggtctggtatga
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