Nitrincola iocasae: F5I99_05405
Help
Entry
F5I99_05405 CDS
T06212
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
nik
Nitrincola iocasae
Pathway
nik00250
Alanine, aspartate and glutamate metabolism
nik00310
Lysine degradation
nik00350
Tyrosine metabolism
nik00650
Butanoate metabolism
nik00760
Nicotinate and nicotinamide metabolism
nik01100
Metabolic pathways
nik01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
F5I99_05405 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
F5I99_05405 (gabD)
00310 Lysine degradation
F5I99_05405 (gabD)
00350 Tyrosine metabolism
F5I99_05405 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
F5I99_05405 (gabD)
Enzymes [BR:
nik01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
F5I99_05405 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
F5I99_05405 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
F5I99_05405 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QEW05972
UniProt:
A0A5J6LCM9
LinkDB
All DBs
Position
complement(1168625..1170079)
Genome browser
AA seq
484 aa
AA seq
DB search
MLQAMQLFRQQAYINGQWVNADSGKTYAIHNPATGDKLGEVPSMGAAETQAAIDAAEAAL
PAWRAKTAKERAVILRRWFDLMMQHQDDLGRLMTLEQGKPLAEAKGEIAYAASFVEWFAE
EAKRVYGETIPGHQADKRIVVIRQPIGVAAAITPWNFPSAMITRKAAPALAAGCTMVLKP
APQTPFSALALVQLAEEAGIPPGVLSVVTATAEDSIAVGNVFCSSDVVRKLSFTGSTGVG
IKLMQQCAPTLKKLSLELGGNAPFVVFDDADLDAAVEGAIISKYRNAGQTCVCANRIYVQ
KGVYDAFAEKFAVAVAKLKVGNGLEDGVTTGPLIDANAVKKVQSHLEDALSKGAKLTTGG
SPHSLGGTFFEPTIITGATPDMLIAREETFGPLAPLFAFEDEADVIHMANDTEYGLAAYF
YARDLGRVWRVAEALEYGMVGINTGVISTEVAPFGGVKSSGLGREGSRHGIEEYLEMKYL
CINI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgttacaagcgatgcagctgtttagacagcaggcttacatcaatggccaatgggtcaat
gccgactcaggtaaaacctatgccattcacaacccggccacgggagacaagctgggtgaa
gtacccagcatgggcgcggctgaaacacaggctgccattgacgccgctgaggcagcccta
ccggcctggcgcgctaaaacagctaaagaacgagctgtaatcctgcgccgctggtttgat
ttgatgatgcagcaccaggatgatctgggtcgtctgatgaccctggaacagggcaaacct
ctggctgaagccaagggtgagattgcctatgccgcatcctttgttgagtggttcgctgaa
gaagccaagcgtgtctatggcgagaccattcctggtcatcaggctgacaaacgcattgtg
gttattcgtcagcccatcggtgtcgcggctgcgatcacgccctggaacttcccatcagcg
atgattacccgtaaagccgcaccagcattggctgccggttgcaccatggtgctcaagcca
gcaccacaaacccccttttccgcacttgcactggttcaactggcagaagaagcgggtatt
ccaccgggcgtactcagcgttgtaacggccactgcagaagactccattgctgtcggcaat
gtgttctgcagcagtgatgtggtgcgtaagctctccttcaccggctctaccggtgtgggg
atcaagctgatgcaacagtgtgcaccgacactgaaaaaactgtcattggaactgggtggt
aatgccccgtttgtagtatttgatgatgctgatctggatgctgccgtagaaggggcaatc
atttccaaataccgtaacgccggtcagacctgtgtatgcgctaaccgcatctatgtgcag
aaaggtgtctacgatgccttcgccgagaaattcgccgtcgcggtggcaaaactcaaagtc
ggtaacggtctggaagacggcgtcactaccggtccattgatcgatgccaatgcggtcaaa
aaagtacaaagccacctggaagatgcactcagcaagggtgccaagctgaccaccggcggt
agccctcattcactgggcggaaccttctttgaaccgaccatcatcaccggcgcaacgccc
gatatgttgattgcccgtgaagagaccttcggcccactggcaccactgttcgcctttgaa
gatgaagctgacgtgattcatatggccaatgacaccgaatatggcctggcagcttacttc
tatgcccgagacctcggtcgtgtctggcgtgtcgctgaagcacttgagtacggcatggtc
ggcattaacaccggcgtaatttccacagaagtggcacccttcggtggcgttaaatcttca
ggtctgggacgtgaaggttcacgtcatggcattgaagaatacctggaaatgaaatacctc
tgcatcaatatctga
DBGET
integrated database retrieval system
