Nitrincola iocasae: F5I99_05415
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Entry
F5I99_05415 CDS
T06212
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
nik
Nitrincola iocasae
Pathway
nik02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F5I99_05415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nik02000
]
F5I99_05415
Transporters [BR:
nik02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
F5I99_05415
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QEW05974
UniProt:
A0A5J6LBA0
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Position
complement(1170956..1172212)
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AA seq
418 aa
AA seq
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MTSITATQTLDGAEPVSGLKAQLRRAERLKKIKAMLLVAPLALFLIVAFVLPISSMLWRS
IDNSEINQVMPQTAAQILKWDGTGIPDEAVFAALAEELRESREDGGLGRIGRRLNYEDPS
FRSLLTRTIRKLPATTEVSWTDELTGIDARWNDTETWHVLLRAAPTTTDRYLLASLDMER
GDDGKITRVEPNQQLYVQVFKRTLVIAGGVTLICLFLGFPLAYLLATLPPAKSNILLIFV
LLPFWTSLLVRTAAWIVLLQSGGLVNAGLMWTGIIDSPMQLVFNRIGVFFAMVHVLLPFM
ILPLYSVMKGVSPTYQRAAVSLGAHPFAAFWQVYVPQTISGIAAGTILVFIMALGYYITP
ALVGGPSDQMVSYYVAYYTNTTNNWGMAAALGALLLFVTLLLYLVYHKLVNKRQLIRS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcattacggccactcagacactcgacggagccgaaccggtttccggcctgaag
gcgcaattgcgccgtgctgaacgcttaaaaaaaataaaggccatgttgctcgtcgcacca
ctggccctatttctgatagttgcctttgtgctgccaatcagcagcatgttatggcgcagc
atcgacaactctgaaatcaaccaggttatgccacaaactgccgcccagattctcaaatgg
gatggtaccgggattccagatgaagccgtgtttgctgcactggctgaagaactacgtgaa
tccagagaggatggtggactcggccgtatcggccggcgactgaactatgaagatcccagt
tttcgttcactgttaactcgcacgatacgcaaactgccagccactaccgaagtcagttgg
acagatgaactgaccggtatagatgcgcgctggaatgacactgaaacctggcatgtgctg
ctacgcgctgcacccactacaaccgaccgctatttattagcctcgctggatatggaacgc
ggtgatgatggcaaaatcacccgggttgaacccaatcagcagttgtatgtccaggtattc
aaacgcacgttggtaattgctggcggcgtcacacttatctgtttattcctgggctttcca
ctggcttatttgctggcaacactgccaccggcgaaaagtaatatcctgctaatttttgtg
ctgctgcctttttggacctcgttactggtccgtacagcggcctggatcgtgctgctgcaa
tccggcggtctggtcaatgcaggtttaatgtggacaggaattattgactcgccgatgcag
ttggtattcaaccgtatcggggtattttttgccatggtacatgtattgctgccgtttatg
attctgccactctacagtgttatgaaaggtgtatcacccacttaccaacgtgctgccgtc
tctttaggtgcacatccttttgccgctttttggcaagtttatgtacctcagactatttcc
ggtatcgcggctggaaccattctggtgttcattatggcgctgggctattacatcacccct
gcactggtgggcggcccttctgatcagatggtgagctattacgtcgcttactacaccaac
accaccaataactggggtatggctgccgcactcggtgccctgttgctgtttgtgaccctg
ttgctgtatctggtgtaccacaaactggtcaacaaacgacaactgatccggagctga
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