Nitrincola iocasae: F5I99_05420
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Entry
F5I99_05420 CDS
T06212
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
nik
Nitrincola iocasae
Pathway
nik02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F5I99_05420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nik02000
]
F5I99_05420
Transporters [BR:
nik02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
F5I99_05420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
QEW05975
UniProt:
A0A5J6LBM7
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All DBs
Position
complement(1172284..1173333)
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AA seq
349 aa
AA seq
DB search
MKLKNKTAKHLLTGSLLAASLAMAGSAQAFTVISFGGANGDALQEAYYTPFASSTGTDLT
PGDYNGEFARIRAMVETGNVSWDLVEVESPELIRGCFEGLFEPIDWEKLGIKDQLISPAV
TECGVGMFVWSTVLAYDADRLEKAPQSWADFWNVEEFPGKRGLRRGAKFTLEFALMADGV
PANEVYDVLATPAGVDRAFAKLEEIQDHIQWWEAGAQPPQWLVAGDVVMSSAYNGRIAVA
QEEGRNLAINWSGSVYDLDYWAIVQGSNNADTAYDFIRFASQPENQAEYSKRIPYGPVTP
EALAQLPEDQAMRMPTNETNLEGALAVNTEFWVDYGEELEQRFNSWASQ
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaaaataaaacagctaaacatctattgactggcagtctgctcgcggcgagt
ctggccatggcgggcagtgcgcaagcctttaccgttatctcctttggtggtgccaatggc
gatgcattgcaggaagcctattatacacctttcgccagcagcaccggtacagacctgacc
ccaggtgactacaatggcgagttcgcacgcattcgcgccatggttgaaaccggtaacgtc
agctgggatctggtagaagttgaatcaccagaacttatccggggttgctttgaagggttg
ttcgagccgattgactgggaaaaactgggcatcaaagatcagttaatttcaccggctgtg
actgagtgtggcgttggtatgtttgtatggtctaccgtgcttgcttatgatgctgaccgc
ctggaaaaggcaccacaaagctgggccgatttctggaatgttgaagagtttccaggtaag
cgcggcctgcgtcgcggtgccaaattcacacttgaatttgcactgatggctgatggcgtt
cctgctaatgaagtttacgatgttctggctacaccagccggtgttgatcgcgccttcgct
aaactggaagaaattcaggatcacattcagtggtgggaagccggtgctcaaccacctcag
tggctggttgccggtgatgtggtcatgtcctcagcttacaacggccgtattgctgttgct
caggaagaaggtcgcaacctggccatcaactggtcaggcagcgtatatgacctggactac
tgggctatcgtacagggcagcaacaacgctgatactgcctatgatttcatccgctttgcc
agccagccagaaaaccaggctgaatactctaaacgcattccttatggtccagtaacgcca
gaagccctggctcagctaccagaggatcaggctatgcgcatgcctaccaacgaaactaac
cttgaaggtgctttggctgtcaacaccgaattctgggttgattacggcgaagaactggaa
cagcgcttcaactcctgggcatctcaataa
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