Nitrincola iocasae: F5I99_05785
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Entry
F5I99_05785 CDS
T06212
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nik
Nitrincola iocasae
Pathway
nik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F5I99_05785 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nik03019
]
F5I99_05785 (recQ)
03400 DNA repair and recombination proteins [BR:
nik03400
]
F5I99_05785 (recQ)
Enzymes [BR:
nik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F5I99_05785 (recQ)
Messenger RNA biogenesis [BR:
nik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F5I99_05785 (recQ)
DNA repair and recombination proteins [BR:
nik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F5I99_05785 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEW06044
UniProt:
A0A5J6LBH5
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All DBs
Position
1264877..1266757
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AA seq
626 aa
AA seq
DB search
MTNHSALFESARKNLIEVFGFSQFRTPQEEVVSTLLSGQDALVVMPTGGGKSLCYQLPSL
VRSGTGVVISPLIALMQDQVSALSQLGIRAGCLNSSIAFEQLQQTEQQLLTGQLDLLYVA
PERLLQPRTLSLLQRTEIALFAIDEAHCVSQWGHDFRPEYMQLGQLAELFPGVPRVALTA
TADARTRDEIVKRLALINARLFVQGFDRPNIRYRIGQKEKAREQLLRFIRTEHEQDVGVV
YCLSRKRVEETAAFLCDKGFNALPYHAGLSADLRQHHQHRFLTEESIIMVATIAFGMGID
KPNVRFVAHLDLPRSIEAYYQETGRAGRDGLPADAWMVYGLQDVLFLRQMLENSQAEDRY
KQVERQKLEAMLGLCEITTCRRQVLLGYFGEPDHPPCGNCDTCLEPVPVWDATDAARKAL
SAVYRSGQRFGVNHVVDILLGQETDKVRQNQHQRISTWGIGKELDRNQWRSVFRQLVARG
LLNVDAEGHGVLLLNDRCRGLLRGEETIELRKDPRIPSGKGKTDFRTAARRDRANPAMRR
LEPAEENLWEDLRALRKRLAQTQDVPPYVIFHDATLMEMVIYRPRTEQQMRSLSGIGERK
FDLYGEAFLSLIEEHQTAPGTWVRPV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatcactccgcactttttgaatctgcccgaaaaaatctgattgaggtgtttggc
ttcagccagttccgtacccctcaggaagaagtggtcagtaccctgctgtctggccaggat
gcactggttgttatgccgacaggcggggggaaatctctgtgttatcagttgccctccctg
gttcgcagtggtaccggggtggtgatttcaccgctgatcgcgctgatgcaggatcaggtg
agcgctttgtctcagttggggattcgggcaggttgtctcaactcatctattgcctttgaa
caactgcagcagacagagcaacagttgctgaccgggcagctggatctgttgtatgtcgct
cctgagcgcctgttgcagccgcggaccctgtcgctgttgcagcgtactgaaattgcactg
tttgccatagatgaagcccattgtgtgtctcagtgggggcatgattttcgccctgaatac
atgcagctcggccaattggcggagctgtttcccggtgtgcctcgtgttgcgttaacggcc
accgctgacgctcgtacacgtgacgaaattgtcaaacgtctggcgttgatcaacgctcgt
ctttttgttcaggggtttgaccgacctaatattcgttaccgtattggccagaaggaaaaa
gcccgcgagcaattgctgcgttttatccgtactgagcatgagcaggatgttggtgtcgtt
tactgtctgtcacgcaaacgggttgaagaaactgccgcttttttgtgtgataagggcttt
aatgccttgccatatcatgcgggattgtcggcggatctgcgtcagcatcatcagcatcgt
tttctgactgaagaatcgatcattatggtggcgactattgcttttggtatgggcatcgat
aaacccaatgtgcgctttgtggcacatctggatctgccgcgttcgattgaagcctattat
caggaaaccgggcgtgccggtcgtgatggactcccggccgatgcctggatggtgtatggg
ttgcaggatgtgctgtttctgcggcagatgctggaaaattctcaggctgaagaccgctat
aaacaggttgaacgtcagaagctggaggcgatgctggggttgtgcgagatcaccacttgt
cgacgtcaggtgttactcggttattttggcgagccggatcatccgccttgtggtaactgc
gacacctgccttgaaccggtacctgtctgggatgcgaccgacgccgctcgcaaggcgctg
tcagcggtttatcgtagtggtcagcgctttggtgttaatcatgtggtggatatattacta
gggcaggagacggataaagttcgtcagaatcagcatcagcgcataagcacctgggggata
ggtaaagagctggatcgtaatcagtggcgctcggtgtttcgccaactggtagcacgaggc
ttactgaatgtggatgccgaagggcatggcgtgctgttgctgaatgatcgctgccgtgga
ttgctacggggtgaagaaactattgaactgcgtaaagatccccgtattccctccggcaaa
ggcaagaccgatttccgtacggcggcacgccgtgatcgcgcaaatccggccatgcgccgc
ctggaaccggctgaagagaatctctgggaagatttgcgagccctgcgaaaacgtttagct
cagacgcaggatgtcccgccttatgttatttttcatgatgcaacactaatggaaatggtg
atctatcgtccccggacggaacagcagatgcgtagtctgagtggcataggtgagcgtaaa
ttcgatctgtatggtgaggcttttctatcgttgattgaggagcatcaaacggcgccgggt
acctgggtcaggccagtatga
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