KEGG   Nitrincola iocasae: F5I99_06200
Entry
F5I99_06200       CDS       T06212                                 
Name
(GenBank) HAMP domain-containing protein
  KO
K03406  methyl-accepting chemotaxis protein
Organism
nik  Nitrincola iocasae
Pathway
nik02020  Two-component system
nik02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:nik00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    F5I99_06200
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    F5I99_06200
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:nik02035]
    F5I99_06200
Bacterial motility proteins [BR:nik02035]
 Flagellar system
  Chemotaxis proteins
   MCPs
    F5I99_06200
SSDB
Motif
Pfam: MCPsignal HAMP HAMP_2 4HB_MCP_1 TMP_3 ATG17_like AAA_13 IFT57 Laminin_II MGT5A_N DUF4200 BLOC1_2
Other DBs
NCBI-ProteinID: QEW06122
UniProt: A0A5J6LD14
LinkDB
Position
1359789..1362029
AA seq 746 aa
MTIKAKISAGFAAVALISLLLGSLGYWGAVRSEASIAELGERRLPAVQTVLEMQVALNNV
VTGFRTLMDQSADTAARNRQYQVIADSREVYRALVNRYDALPKSAEEERAWQVFQTTLPD
WLAANNEIAVLHQELDELRIANPQAFVGDLQDRIAEATMGETLRYQEAAFTALDQVVRLN
MNAAASQVEFGINQAALLKTISLLAMLIGVILSAGLGFIITRGITRPLTLMVNAVERVRD
SGNFNEQVNYTQKDEIGQVIRAFNTLLSSQKHALEEANTTIEALASGDFNARIQGEYAGD
LDALKTGINSSAETIRLTMDELSKVMQAIRQGEFGVSINPALVRGDYRLMLENAAHGMQS
LKRSVDSVVQVMTQVAEGQFGARVDADASGEMLKLKNMINQSVSALETAFMEIQRVMQAL
AKGDLTEQVQGQYPGDLGTLADAANTTVVQLSDVIQQIHQSVGNVNTAATEISAGNTDLS
QRTEEQASSLEETASSMEELTSTVKQNADNARQANQLAGQANRVAEAGGSKVQEAVATMH
ELTASSEKITNIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSAA
AAKEIQSLIKEDAGIVENGSRLVREAGVSMDEIVQSVKRVTDIMAEISAASEEQSQGIEQ
INQAITQMDDVTQQNAALVEEAAAAAESLEDQAASLSQAVSVFKMNLSDRQAVRPPKLQA
NPVNKRPATIKHLPHAGTSEDEWEEF
NT seq 2241 nt   +upstreamnt  +downstreamnt
atgacaattaaagctaaaatatccgcaggttttgctgcagtagcactgatctctctgctg
cttggcagtctgggctactggggggctgttcgcagtgaagcgagcattgccgaactgggt
gaacgacgcctgccagcagtgcagactgtgttggaaatgcaggtggctctgaacaatgta
gtgactggtttcagaacgctaatggatcaaagtgctgatacggcggcacgtaatcgccag
tatcaggtcattgcggatagtcgtgaagtctatcgggccctggtaaatcgttacgatgct
ttgccaaagtctgccgaagaggagcgcgcctggcaggtatttcaaactaccctgccagac
tggctggcagcaaataacgagatagccgtgttacatcaggagctggatgaactgcgtatt
gctaaccctcaggcctttgtcggtgatcttcaagaccgcattgccgaagcaaccatgggt
gagaccctgcgctaccaggaagcagcatttactgcattggatcaggtggtgcggttgaac
atgaatgcagccgctagccaggttgaattcggtatcaatcaggcggcattattaaaaacc
atcagcctgctggcaatgttgataggggttattctgtctgccggactgggctttatcatc
acgcgtggtattacacgtcctttgactcttatggtcaatgcagttgagcgtgttcgcgat
agtggcaatttcaatgagcaagtcaactatacccagaaggatgagattggtcaggttatt
cgtgcattcaacaccttgctgagttcgcaaaagcatgcccttgaagaggctaacactacc
atcgaagccctggcttcaggtgattttaacgcccgcattcagggggagtatgccggcgat
cttgatgcgttgaagaccggtatcaacagtagtgcagagacgattcgtctgactatggat
gaattatccaaggtgatgcaggctatccgtcagggcgagtttggtgtgtcgattaatccg
gcactggttcgcggtgactatcgactcatgctcgaaaatgccgctcatggcatgcagtcg
cttaaacgcagtgtcgattctgtcgtgcaggttatgactcaggtagctgagggacagttt
ggagctcgtgttgatgcggatgcttccggtgaaatgctgaaattgaaaaatatgattaat
cagtcagtgtctgcgctggaaacagcattcatggaaattcaacgggtaatgcaggcgttg
gctaaaggggatttgactgagcaggttcaaggtcaatatccaggagacttggggacactg
gccgatgcggccaataccacggtggtacagttgtcggatgtcatccaacaaattcaccag
tctgtaggaaatgtgaatacggcagctaccgaaatttcagcgggcaataccgatttatct
cagcgtaccgaagaacaggcatccagccttgaggaaacggcttccagtatggaagagctg
acgagtacggtaaaacaaaatgccgataatgcccgtcaggctaatcagttggcaggacaa
gctaaccgagttgccgaagcgggtggaagcaaggttcaggaggctgtggcgaccatgcat
gagctgacagccagttctgaaaaaatcaccaatatcatcagcgtgattgacgggattgct
ttccaaaccaacatactcgccttgaatgcggctgttgaagcggcccgggcgggtgagcaa
gggcgtggttttgctgtagttgccggagaagtcagaactctggctcagcgttcagctgcc
gctgctaaagaaattcagtcgctgattaaagaagacgccggaattgtagaaaatggcagt
cgcttggtccgcgaagctggcgtatcaatggatgaaattgtgcaatcagtgaagcgtgta
accgacatcatggctgaaatatcggcagcatctgaagagcaaagccagggtattgaacag
atcaatcaggctattacacagatggacgatgttacccagcaaaatgcggcgctggtagaa
gaggctgctgccgctgctgagtctctggaggatcaagccgcttccttatcgcaggcggtt
tccgtattcaagatgaatctgtctgacaggcaagccgtgcggccacccaaactgcaggca
aatcctgtaaacaaacgaccggctaccattaaacacctgccacatgctggaacgtcagaa
gatgagtgggaggagttctaa

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