Nitrincola iocasae: F5I99_06200
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Entry
F5I99_06200 CDS
T06212
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
nik
Nitrincola iocasae
Pathway
nik02020
Two-component system
nik02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F5I99_06200
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
F5I99_06200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nik02035
]
F5I99_06200
Bacterial motility proteins [BR:
nik02035
]
Flagellar system
Chemotaxis proteins
MCPs
F5I99_06200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
HAMP_2
4HB_MCP_1
TMP_3
ATG17_like
AAA_13
IFT57
Laminin_II
MGT5A_N
DUF4200
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
QEW06122
UniProt:
A0A5J6LD14
LinkDB
All DBs
Position
1359789..1362029
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AA seq
746 aa
AA seq
DB search
MTIKAKISAGFAAVALISLLLGSLGYWGAVRSEASIAELGERRLPAVQTVLEMQVALNNV
VTGFRTLMDQSADTAARNRQYQVIADSREVYRALVNRYDALPKSAEEERAWQVFQTTLPD
WLAANNEIAVLHQELDELRIANPQAFVGDLQDRIAEATMGETLRYQEAAFTALDQVVRLN
MNAAASQVEFGINQAALLKTISLLAMLIGVILSAGLGFIITRGITRPLTLMVNAVERVRD
SGNFNEQVNYTQKDEIGQVIRAFNTLLSSQKHALEEANTTIEALASGDFNARIQGEYAGD
LDALKTGINSSAETIRLTMDELSKVMQAIRQGEFGVSINPALVRGDYRLMLENAAHGMQS
LKRSVDSVVQVMTQVAEGQFGARVDADASGEMLKLKNMINQSVSALETAFMEIQRVMQAL
AKGDLTEQVQGQYPGDLGTLADAANTTVVQLSDVIQQIHQSVGNVNTAATEISAGNTDLS
QRTEEQASSLEETASSMEELTSTVKQNADNARQANQLAGQANRVAEAGGSKVQEAVATMH
ELTASSEKITNIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSAA
AAKEIQSLIKEDAGIVENGSRLVREAGVSMDEIVQSVKRVTDIMAEISAASEEQSQGIEQ
INQAITQMDDVTQQNAALVEEAAAAAESLEDQAASLSQAVSVFKMNLSDRQAVRPPKLQA
NPVNKRPATIKHLPHAGTSEDEWEEF
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgacaattaaagctaaaatatccgcaggttttgctgcagtagcactgatctctctgctg
cttggcagtctgggctactggggggctgttcgcagtgaagcgagcattgccgaactgggt
gaacgacgcctgccagcagtgcagactgtgttggaaatgcaggtggctctgaacaatgta
gtgactggtttcagaacgctaatggatcaaagtgctgatacggcggcacgtaatcgccag
tatcaggtcattgcggatagtcgtgaagtctatcgggccctggtaaatcgttacgatgct
ttgccaaagtctgccgaagaggagcgcgcctggcaggtatttcaaactaccctgccagac
tggctggcagcaaataacgagatagccgtgttacatcaggagctggatgaactgcgtatt
gctaaccctcaggcctttgtcggtgatcttcaagaccgcattgccgaagcaaccatgggt
gagaccctgcgctaccaggaagcagcatttactgcattggatcaggtggtgcggttgaac
atgaatgcagccgctagccaggttgaattcggtatcaatcaggcggcattattaaaaacc
atcagcctgctggcaatgttgataggggttattctgtctgccggactgggctttatcatc
acgcgtggtattacacgtcctttgactcttatggtcaatgcagttgagcgtgttcgcgat
agtggcaatttcaatgagcaagtcaactatacccagaaggatgagattggtcaggttatt
cgtgcattcaacaccttgctgagttcgcaaaagcatgcccttgaagaggctaacactacc
atcgaagccctggcttcaggtgattttaacgcccgcattcagggggagtatgccggcgat
cttgatgcgttgaagaccggtatcaacagtagtgcagagacgattcgtctgactatggat
gaattatccaaggtgatgcaggctatccgtcagggcgagtttggtgtgtcgattaatccg
gcactggttcgcggtgactatcgactcatgctcgaaaatgccgctcatggcatgcagtcg
cttaaacgcagtgtcgattctgtcgtgcaggttatgactcaggtagctgagggacagttt
ggagctcgtgttgatgcggatgcttccggtgaaatgctgaaattgaaaaatatgattaat
cagtcagtgtctgcgctggaaacagcattcatggaaattcaacgggtaatgcaggcgttg
gctaaaggggatttgactgagcaggttcaaggtcaatatccaggagacttggggacactg
gccgatgcggccaataccacggtggtacagttgtcggatgtcatccaacaaattcaccag
tctgtaggaaatgtgaatacggcagctaccgaaatttcagcgggcaataccgatttatct
cagcgtaccgaagaacaggcatccagccttgaggaaacggcttccagtatggaagagctg
acgagtacggtaaaacaaaatgccgataatgcccgtcaggctaatcagttggcaggacaa
gctaaccgagttgccgaagcgggtggaagcaaggttcaggaggctgtggcgaccatgcat
gagctgacagccagttctgaaaaaatcaccaatatcatcagcgtgattgacgggattgct
ttccaaaccaacatactcgccttgaatgcggctgttgaagcggcccgggcgggtgagcaa
gggcgtggttttgctgtagttgccggagaagtcagaactctggctcagcgttcagctgcc
gctgctaaagaaattcagtcgctgattaaagaagacgccggaattgtagaaaatggcagt
cgcttggtccgcgaagctggcgtatcaatggatgaaattgtgcaatcagtgaagcgtgta
accgacatcatggctgaaatatcggcagcatctgaagagcaaagccagggtattgaacag
atcaatcaggctattacacagatggacgatgttacccagcaaaatgcggcgctggtagaa
gaggctgctgccgctgctgagtctctggaggatcaagccgcttccttatcgcaggcggtt
tccgtattcaagatgaatctgtctgacaggcaagccgtgcggccacccaaactgcaggca
aatcctgtaaacaaacgaccggctaccattaaacacctgccacatgctggaacgtcagaa
gatgagtgggaggagttctaa
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