KEGG   Nitrincola iocasae: F5I99_06675
Entry
F5I99_06675       CDS       T06212                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
nik  Nitrincola iocasae
Pathway
nik00010  Glycolysis / Gluconeogenesis
nik00020  Citrate cycle (TCA cycle)
nik00260  Glycine, serine and threonine metabolism
nik00280  Valine, leucine and isoleucine degradation
nik00310  Lysine degradation
nik00380  Tryptophan metabolism
nik00620  Pyruvate metabolism
nik00630  Glyoxylate and dicarboxylate metabolism
nik00640  Propanoate metabolism
nik00670  One carbon pool by folate
nik00785  Lipoic acid metabolism
nik01100  Metabolic pathways
nik01110  Biosynthesis of secondary metabolites
nik01120  Microbial metabolism in diverse environments
nik01200  Carbon metabolism
nik01210  2-Oxocarboxylic acid metabolism
nik01240  Biosynthesis of cofactors
Module
nik_M00009  Citrate cycle (TCA cycle, Krebs cycle)
nik_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nik_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
nik_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
nik_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:nik00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    F5I99_06675 (lpdA)
   00020 Citrate cycle (TCA cycle)
    F5I99_06675 (lpdA)
   00620 Pyruvate metabolism
    F5I99_06675 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    F5I99_06675 (lpdA)
   00640 Propanoate metabolism
    F5I99_06675 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    F5I99_06675 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    F5I99_06675 (lpdA)
   00310 Lysine degradation
    F5I99_06675 (lpdA)
   00380 Tryptophan metabolism
    F5I99_06675 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    F5I99_06675 (lpdA)
   00670 One carbon pool by folate
    F5I99_06675 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nik04147]
    F5I99_06675 (lpdA)
Enzymes [BR:nik01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     F5I99_06675 (lpdA)
Exosome [BR:nik04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   F5I99_06675 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA FAD_oxidored FAD_binding_3 Thi4 HI0933_like NAD_binding_8 3HCDH_N AlaDh_PNT_C DAO 2-Hacid_dh_C UDPG_MGDP_dh_N DUF3373 Amino_oxidase
Other DBs
NCBI-ProteinID: QEW06205
UniProt: A0A5J6LC97
LinkDB
Position
1452032..1453468
AA seq 478 aa
MSDKFDVIIIGSGPGGYVAAIRAAQLGLKTACVEKWVDNKGAPVLGGTCLNVGCIPSKAL
LETTHKLHEAQHGFAAQGILADNVHMDTKQMVSRKNQIVKNLTGGIAGLFKANGVTLLQG
KGKLLANKQVEVTANDGSVSLHEAENVILASGSVPVEIPPAPLTEGLILDNAGALDIDEV
PKRLGIIGAGVIGLEMGSIWARCGSEVTVLEAMDSFLALADQDVAKEAHKQMTKQGLDIK
LGARCTGTEVKGKEVTVKYTDAKGEQELVVDKLIVAVGRRPLTQGLVTDDTGVKLDERGF
IFVDEQCRTNAPGVYAIGDIVRGPMLAHKASEEGIMVVDIIAGHKAQLNYDCVPNIIYTF
PELAWVGKTEQELKNEGVAIKIGKFPFAASGRAMAANATEGFVKMIADEKTDRILGVHIV
GGIASELIAQAVIAMEFCSTAEDLQMTVFAHPTVSEAVHEAALAVDNHAIHVANRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtctgataagtttgatgtaattataattggttccggtcctggcggttatgtagctgct
atacgtgccgcacagttaggcctgaaaacggcttgtgttgaaaaatgggttgataataag
ggcgcgccggtattaggcggcacctgtctgaacgtaggttgtattccgtctaaagcactg
ctggaaacgacccacaagttgcatgaagcacaacatggctttgctgcacagggtatcctg
gctgacaacgtgcatatggacaccaaacagatggtgagccgtaagaaccagatcgtaaaa
aatctgaccggtggtatcgctggtttgttcaaagccaatggcgttaccttactgcagggt
aaaggcaagttgctggccaacaaacaggttgaagtgactgccaatgatggttctgtcagc
ctgcacgaagccgaaaatgtcatcctggcttccggttctgtaccggttgaaattccgcca
gcgcctctgacagaaggcttgattctggataatgccggtgcgttggatatcgatgaagtg
cccaagcgcctgggtattatcggtgctggcgttatcggtctggaaatgggttctatctgg
gcacgttgtggttcagaagtcaccgtactggaagcgatggactctttcctggccctggcc
gatcaggacgttgccaaagaagctcacaaacagatgaccaagcagggcctggatattaaa
ctgggtgcccgctgtaccggaactgaagtcaaaggcaaggaagtgactgttaagtacact
gatgccaaaggtgaacaggaactggtagtcgacaagctgatcgtagctgtaggtcgacgc
ccactgactcagggcctggtcactgacgacactggcgtcaaactggacgagcgtggcttc
atcttcgttgatgagcaatgccgtaccaatgcccctggcgtatatgccataggtgatatt
gttcgtggtccgatgctggcgcataaagcgtctgaagaaggcattatggtcgtggatatc
atcgccggtcataaagcacagttaaactacgactgtgttccgaacatcatttacactttc
cctgaactggcttgggtcggtaaaaccgagcaagagctgaaaaatgaaggtgtagcgatc
aagattggtaagttcccgttcgcggcatcaggccgtgcaatggcagccaatgccacagaa
ggtttcgtcaaaatgattgctgacgaaaaaaccgatcgtattctgggtgtacatatcgtt
ggtggtatcgcctcagaacttatcgcgcaagcggtgattgcgatggaattctgttcaact
gcagaagatctgcagatgacagtatttgctcacccaactgtgagtgaagcggttcatgaa
gccgcactggctgtggataaccatgctatccatgtagccaaccgtaaaaagcgctaa

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