Nitrincola iocasae: F5I99_06675
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Entry
F5I99_06675 CDS
T06212
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
nik
Nitrincola iocasae
Pathway
nik00010
Glycolysis / Gluconeogenesis
nik00020
Citrate cycle (TCA cycle)
nik00260
Glycine, serine and threonine metabolism
nik00280
Valine, leucine and isoleucine degradation
nik00310
Lysine degradation
nik00380
Tryptophan metabolism
nik00620
Pyruvate metabolism
nik00630
Glyoxylate and dicarboxylate metabolism
nik00640
Propanoate metabolism
nik00670
One carbon pool by folate
nik00785
Lipoic acid metabolism
nik01100
Metabolic pathways
nik01110
Biosynthesis of secondary metabolites
nik01120
Microbial metabolism in diverse environments
nik01200
Carbon metabolism
nik01210
2-Oxocarboxylic acid metabolism
nik01240
Biosynthesis of cofactors
Module
nik_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nik_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nik_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
nik_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
nik_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
F5I99_06675 (lpdA)
00020 Citrate cycle (TCA cycle)
F5I99_06675 (lpdA)
00620 Pyruvate metabolism
F5I99_06675 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
F5I99_06675 (lpdA)
00640 Propanoate metabolism
F5I99_06675 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
F5I99_06675 (lpdA)
00280 Valine, leucine and isoleucine degradation
F5I99_06675 (lpdA)
00310 Lysine degradation
F5I99_06675 (lpdA)
00380 Tryptophan metabolism
F5I99_06675 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
F5I99_06675 (lpdA)
00670 One carbon pool by folate
F5I99_06675 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nik04147
]
F5I99_06675 (lpdA)
Enzymes [BR:
nik01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
F5I99_06675 (lpdA)
Exosome [BR:
nik04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
F5I99_06675 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
GIDA
FAD_oxidored
FAD_binding_3
Thi4
HI0933_like
NAD_binding_8
3HCDH_N
AlaDh_PNT_C
DAO
2-Hacid_dh_C
UDPG_MGDP_dh_N
DUF3373
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
QEW06205
UniProt:
A0A5J6LC97
LinkDB
All DBs
Position
1452032..1453468
Genome browser
AA seq
478 aa
AA seq
DB search
MSDKFDVIIIGSGPGGYVAAIRAAQLGLKTACVEKWVDNKGAPVLGGTCLNVGCIPSKAL
LETTHKLHEAQHGFAAQGILADNVHMDTKQMVSRKNQIVKNLTGGIAGLFKANGVTLLQG
KGKLLANKQVEVTANDGSVSLHEAENVILASGSVPVEIPPAPLTEGLILDNAGALDIDEV
PKRLGIIGAGVIGLEMGSIWARCGSEVTVLEAMDSFLALADQDVAKEAHKQMTKQGLDIK
LGARCTGTEVKGKEVTVKYTDAKGEQELVVDKLIVAVGRRPLTQGLVTDDTGVKLDERGF
IFVDEQCRTNAPGVYAIGDIVRGPMLAHKASEEGIMVVDIIAGHKAQLNYDCVPNIIYTF
PELAWVGKTEQELKNEGVAIKIGKFPFAASGRAMAANATEGFVKMIADEKTDRILGVHIV
GGIASELIAQAVIAMEFCSTAEDLQMTVFAHPTVSEAVHEAALAVDNHAIHVANRKKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataagtttgatgtaattataattggttccggtcctggcggttatgtagctgct
atacgtgccgcacagttaggcctgaaaacggcttgtgttgaaaaatgggttgataataag
ggcgcgccggtattaggcggcacctgtctgaacgtaggttgtattccgtctaaagcactg
ctggaaacgacccacaagttgcatgaagcacaacatggctttgctgcacagggtatcctg
gctgacaacgtgcatatggacaccaaacagatggtgagccgtaagaaccagatcgtaaaa
aatctgaccggtggtatcgctggtttgttcaaagccaatggcgttaccttactgcagggt
aaaggcaagttgctggccaacaaacaggttgaagtgactgccaatgatggttctgtcagc
ctgcacgaagccgaaaatgtcatcctggcttccggttctgtaccggttgaaattccgcca
gcgcctctgacagaaggcttgattctggataatgccggtgcgttggatatcgatgaagtg
cccaagcgcctgggtattatcggtgctggcgttatcggtctggaaatgggttctatctgg
gcacgttgtggttcagaagtcaccgtactggaagcgatggactctttcctggccctggcc
gatcaggacgttgccaaagaagctcacaaacagatgaccaagcagggcctggatattaaa
ctgggtgcccgctgtaccggaactgaagtcaaaggcaaggaagtgactgttaagtacact
gatgccaaaggtgaacaggaactggtagtcgacaagctgatcgtagctgtaggtcgacgc
ccactgactcagggcctggtcactgacgacactggcgtcaaactggacgagcgtggcttc
atcttcgttgatgagcaatgccgtaccaatgcccctggcgtatatgccataggtgatatt
gttcgtggtccgatgctggcgcataaagcgtctgaagaaggcattatggtcgtggatatc
atcgccggtcataaagcacagttaaactacgactgtgttccgaacatcatttacactttc
cctgaactggcttgggtcggtaaaaccgagcaagagctgaaaaatgaaggtgtagcgatc
aagattggtaagttcccgttcgcggcatcaggccgtgcaatggcagccaatgccacagaa
ggtttcgtcaaaatgattgctgacgaaaaaaccgatcgtattctgggtgtacatatcgtt
ggtggtatcgcctcagaacttatcgcgcaagcggtgattgcgatggaattctgttcaact
gcagaagatctgcagatgacagtatttgctcacccaactgtgagtgaagcggttcatgaa
gccgcactggctgtggataaccatgctatccatgtagccaaccgtaaaaagcgctaa
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