Nitrincola iocasae: F5I99_07170
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Entry
F5I99_07170 CDS
T06212
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
nik
Nitrincola iocasae
Pathway
nik03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F5I99_07170 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nik03400
]
F5I99_07170 (uvrB)
DNA repair and recombination proteins [BR:
nik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F5I99_07170 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F5I99_07170 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QEW06298
UniProt:
A0A5J6LD91
LinkDB
All DBs
Position
1579971..1581992
Genome browser
AA seq
673 aa
AA seq
DB search
MKQRFKVHSGFQPAGDQPEAISALVDGIESGLASQTLLGVTGSGKTFTIANVIAAVQRPT
IIMAHNKTLAAQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERKDAIIVATVSAIYGLGDPKSYLSMMLHLDRGDQVDQRTLLRRLAELQ
YTRNDVELHRGNYRVRGDVIDVFPAESEMEAIRIELFDEEVEQISYFDPLTGEVLRRVPR
ATIYPKTHYVTPRDTLVEATQYIKAELIERLALLKENNKLVEAQRLEQRTLYDIEMILEL
GYCSGIENYSRYLSGRDLGMAPPTLFDYLPNDALLVIDESHVTVPQIGAMYRGDRSRKET
LVEYGFRLPSALDNRPLKFEEWEELAPQMIFVSATPSKYEAANAQQIVEQVVRPTGLIDP
MVEVRPAVSQVDDLLGEIHKVTALKERVVVTVLTKRMAEDLTEYLAEHGVRVRYLHSDID
TVERVEIIRDLRIGEFDVLVGINLLREGIDMPEVSLVTILDADKEGFLRSETSMIQTIGR
AARNVNGRAILYADRITGSMQRAMDETDRRRNKQIAYNLEHGITPKGIFKSVADIMEGAQ
APGSRKSSRGARKAAETQGDYLVNEAALSPKELAKALTRLEDQMYEAARNLEFEKAANFR
DELERLKHSANVL
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcagcgttttaaagtgcattccggtttccagcctgccggggatcagcccgaagcg
atcagtgcgctggtcgatgggatagagtcgggcctggcttcacagaccttgctgggggta
accgggtcgggaaaaaccttcaccattgccaacgttattgcggctgtacagcgccccacc
atcatcatggcgcataacaaaaccctggcggcgcagctctatggtgagttcaaggagttc
tttccggataatgccgtagagtatttcgtttcctactacgactattaccagccggaagcc
tatgtgccgtcatctgatacctttatcgagaaggatgcctcgatcaatgaccatatagag
cagatgcgcctgtcggcaaccaaggcactgttggagcgcaaggacgcgatcattgtggca
acggtgtcggcgatctatggtctgggtgatccgaaatcctatctgtcgatgatgttacat
ctggatcgtggtgatcaggttgatcaacgcaccctgttacgtcgcctggctgagctgcaa
tacacccgcaacgatgtcgaactgcatcgcggtaattaccgggtgcgtggcgatgtgatt
gatgtgtttccggctgaatcggaaatggaggcgattcgcatagaactcttcgatgaagag
gtggagcagatcagttattttgatccgctcactggtgaagtgttgcgtcgcgtgccgcgt
gccacgatttatcctaagacccactatgtcactccacgcgacaccctggtcgaggcgacg
cagtatattaaggctgagctgattgagcgcctggcactgcttaaggaaaacaacaaactg
gtggaagcgcagcgtctggagcagcgcaccttatatgacatagagatgatcctggaattg
ggttattgctccggcatcgagaactactcacgctacttgtccgggcgtgatctgggtatg
gcaccacctacgttattcgattatctaccgaacgatgccttgctggtgatagatgagtcg
catgtaaccgtgccacaaatcggggcgatgtaccggggtgaccgttcgcgtaaggaaact
ctggtggaatatggcttccgtctgccttcagcgctggataaccggccactcaaatttgaa
gagtgggaagaactggcgccacagatgattttcgtttcagccacgccgagcaagtatgaa
gcggcgaatgcgcagcagatcgtcgagcaggtggtacgacctaccggcttgatcgatccg
atggtcgaggtgcgccctgcggtttctcaggtggatgacctgctgggtgaaatccataag
gtgacggcactgaaagaacgcgtggtggtaacagtgctgaccaagcgcatggcagaagat
ctcactgagtatctggctgagcacggtgtcagggtgcgttaccttcattcagatatagat
acggtagagcgggttgagattatccgtgatctgcgcattggtgagtttgatgtgctggtg
gggattaacctgctgcgggaagggatcgatatgcctgaggtctcgctggtgactattctg
gatgcggacaaagagggtttcctgcgttcggaaacctccatgatccagaccattggccgg
gccgcacgtaacgttaacggtcgtgcgattctctatgctgaccggatcacgggttcgatg
cagcgtgcgatggatgaaaccgatcgacgccgcaacaaacagattgcctataacctcgaa
catggtattacccccaagggcatcttcaagtctgtggccgatattatggaaggtgctcag
gcaccgggctctcgcaaatcatctcgtggtgcgcgcaaggcggccgaaactcagggcgat
tatctggttaatgaagccgctttgtcacctaaagagctggctaaagcgctgacccgcctg
gaagaccaaatgtatgaagcggcacgcaatcttgagtttgaaaaagcggctaatttccgt
gatgagttggagcgtctgaagcacagtgccaacgtactttga
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