Nitrincola iocasae: F5I99_07840
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Entry
F5I99_07840 CDS
T06212
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
nik
Nitrincola iocasae
Pathway
nik00280
Valine, leucine and isoleucine degradation
nik00650
Butanoate metabolism
nik00907
Pinene, camphor and geraniol degradation
nik01100
Metabolic pathways
nik01120
Microbial metabolism in diverse environments
nik04146
Peroxisome
Module
nik_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
F5I99_07840
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
F5I99_07840
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
F5I99_07840
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F5I99_07840
Enzymes [BR:
nik01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
F5I99_07840
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
QEW06425
UniProt:
A0A5J6LCV4
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Position
complement(1694595..1695509)
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AA seq
304 aa
AA seq
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MSFPSQVRVFEMSPRDGLQNEPGELITTAVKIELINRLSACGLSHIEAASFVSPKWVPQM
GDASEVMAGITRKAGVTYAALTPNLKGVESAFAAEVDEIAVFSAASEAFTQKNINCSIAE
SLARFEPVLEAARNKGIKVRGYVSTVMGCPYQGDVDPKQVAQVANALYAMGCYEISLGDT
IGVGTPLKAKRMLEAVNRDIPMNNLAAHFHDTYGQAIGNLYAVLEEGLAVVDASVAGLGG
CPYARGASGNVATEDVLYLLQGLGIETGINLQDLINTGDWITRQLKRANGSKVALALGAQ
HEQK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcccctcccaggtacgtgtctttgagatgagcccccgcgatgggctacagaat
gagcccggcgaactcatcacaacagcggttaaaattgagctgatcaaccgcttgagcgcc
tgcggtttgagccatattgaagccgccagttttgtctcaccaaaatgggtaccacagatg
ggtgatgccagtgaggttatggccggtatcacccgtaaggccggcgttacctatgccgcg
cttaccccgaatcttaaaggggtagagtcagcgtttgccgccgaagttgatgagatcgcc
gtattcagtgctgcttctgaagcctttacgcaaaaaaatatcaactgttccattgcagaa
agcctggcacgttttgagccagtcctggaagcggcacgcaataaaggcatcaaggtccgg
gggtatgtatccaccgtgatgggttgtccttatcagggcgacgtcgatcccaaacaggtt
gcccaggttgctaacgctctttacgccatgggctgctatgaaatttcgcttggcgacacc
atcggggtgggtacgcccttaaaagccaaacgcatgcttgaagccgttaatcgggatata
ccgatgaacaatctggctgcacattttcatgacacctatggacaggctattggcaaccta
tatgcggttcttgaagaggggctggccgttgttgatgcctccgtcgccggtctgggtggt
tgcccttatgcccgcggtgcatccggtaatgttgccactgaagatgtgctgtatttactt
caggggctaggcatagaaaccggcatcaacctgcaggatctgattaataccggtgactgg
attacccgtcagctcaaacgcgctaacggctccaaagttgcccttgctctgggagcacag
catgaacaaaaataa
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