Nitrincola iocasae: F5I99_09385
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Entry
F5I99_09385 CDS
T06212
Name
(GenBank) ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
nik
Nitrincola iocasae
Pathway
nik00630
Glyoxylate and dicarboxylate metabolism
nik00710
Carbon fixation by Calvin cycle
nik01100
Metabolic pathways
nik01110
Biosynthesis of secondary metabolites
nik01120
Microbial metabolism in diverse environments
nik01200
Carbon metabolism
Module
nik_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
F5I99_09385
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
F5I99_09385
Enzymes [BR:
nik01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
F5I99_09385
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
QEW06697
UniProt:
A0A5J6LDS5
LinkDB
All DBs
Position
complement(2002885..2004264)
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AA seq
459 aa
AA seq
DB search
MDQSKRYARLDLLEDELMKGGKHVLAAYKMKPKTGYGYLESAAHFAAESSTGTNVEISTT
DDFTRGVDALVYHIDEATEDMRIAYPIDLFDRNMLDGKTMLVSFLTLAIGNNQGMGDIEY
AKMIDFYVPPEMLDLYDGPQVNIEDLWRILGRPEKDGGYIAGTIIKPKLGLRPEPFAKAA
YQFWLGGDFIKNDEPQGNQVFAPMKQVIPLVVDAMRRAMDETGQAKIFSANITADWHDEM
IARGEFILDAFGTDADKVAFLVDGYVGGPGMVTTARRYFPNQFLHYHRAGHGAVTSPSAK
RGYSAYVLAKMSRLQGASGIHVGTMGYGKMEGEKDDRAIAYIIERDSFQGPVYFQDWNGM
KATTPIISGGMNALRLPGFFENLGHGNVINTAGGGAYGHIDSPAAGALSLRQAYECWKAG
ADPIEWAKEHPEFARAFESFPNDADAIFPGWRDKISSHR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatcaaaacgctatgcccgcttggacctgcttgaagacgaattgatgaagggt
ggcaagcatgtacttgccgcctacaaaatgaagcccaaaactggttatggctatcttgaa
tctgctgctcactttgcggctgagtcttccacaggcaccaacgtagaaatcagtaccacc
gatgatttcacccgaggcgtggatgcattggtttatcacatagatgaagccacagaggat
atgcgtattgcctatcccatcgatttgtttgaccgcaatatgctggatggaaaaaccatg
ctggtgtctttcctgacactggccataggcaacaaccagggcatgggtgacatagaatat
gccaagatgatcgatttttatgtaccccccgagatgttggatctgtatgacggtccgcag
gtcaatatagaagacttgtggcgcatcctgggacggccggaaaaagatggcggttatatc
gccggtacgattatcaagcctaaattgggcttacgacccgaaccctttgccaaagccgcc
tatcaattctggttgggtggggatttcatcaaaaacgatgagccacaaggcaatcaggtt
tttgcgccgatgaagcaggtgattccgctggtggtggatgccatgcgccgggcgatggat
gaaaccggtcaggccaaaatattctcggccaacattaccgctgactggcatgatgaaatg
atcgcccgaggtgagtttatcctggacgcctttggtaccgatgccgataaagtcgccttt
ctggtagatggttatgtcggtggtcctggtatggtcaccacagctcgacgctattttccc
aatcagtttctgcactaccatcgtgccggtcatggtgcggtaacttccccgtcggctaag
cgcggttacagtgcctatgtgctggcgaaaatgtcccgtttacaaggggcctcgggtatc
catgttggtaccatgggctatggcaagatggaaggcgaaaaggatgatcgtgctatcgcc
tatatcatcgaacgtgacagctttcagggcccggtctatttccaggactggaatggaatg
aaggctaccacaccgattatttccggtggtatgaatgcgctgcgcttacccggatttttt
gaaaatctcgggcatggcaatgttattaataccgcaggcggtggtgcttacggccatatt
gacagcccggcggctggagcgctgtccttgcgtcaagcctatgaatgttggaaagccggt
gcggaccccatcgaatgggccaaagaacatcctgagtttgcgcgggcctttgagtccttc
ccgaacgatgccgatgcgatattccctggctggcgcgacaaaatcagctctcaccgttaa
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