Nitrincola iocasae: F5I99_09390
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Entry
F5I99_09390 CDS
T06212
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
nik
Nitrincola iocasae
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nik03000
]
F5I99_09390
Transcription factors [BR:
nik03000
]
Prokaryotic type
Helix-turn-helix
LysR family
F5I99_09390
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QEW06698
UniProt:
A0A5J6LE86
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Position
complement(2004361..2005347)
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AA seq
328 aa
AA seq
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MFNEEIERTSDLRRAIMNPHYTLKQLKTFIEVAQHSSVSLAAEHVHVTQPAISMQLKQLE
DSFGVSLFQPQGRNIELTPAGEDFYAYCLKVMATLKDLESVMSEHAGAKRGRINLAIVST
AKYFTPKLLAAFNREFPDIHINLFIDNKETVFRELERSAVDMVISGRVPEHLNCTSLVFA
DNPQSFVAHPAHPLAHQRAISYNQLAKYPFVIREQGSGTRSAVEKLFAAHGVDLQVTMEF
PSNEVIKQAVLADMGISFLSHRTMVKELKHGYLKTLDIEGEPYISEWQVAHLKTKKLSPA
LTCFKQFLSQQGQQLLDSDDLELLVGLK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaagaaattgagagaacctctgacctgagaagagcaatcatgaatccgcat
tacacgcttaaacagctgaaaacctttattgaagtggctcagcacagttcggtttcgctg
gccgctgagcatgtgcatgttactcaaccggcgatttcaatgcagttaaagcagttggag
gacagctttggggtttccctgttccagcctcagggtcgaaacatcgagctaacccctgcg
ggtgaagatttttatgcctactgccttaaagtgatggcgaccctgaaagacctggaatcg
gtaatgtcggagcatgctggcgccaaacggggacggattaatctggcgattgtcagcacg
gcaaaatatttcactccaaagctgttggcggcttttaatcgtgagttcccggatattcac
atcaatctgtttatcgataataaagaaaccgttttccgtgagctggaacgttcagcggta
gatatggttatttcgggtcgtgtgccagagcacctgaactgtacctctttggtgtttgct
gacaatccgcaaagttttgtagcccaccccgctcaccctttggctcaccagcgtgccatt
agttataaccaactggccaaatacccatttgtcatacgtgagcagggctccggcacccgc
tcagcagtcgaaaaactcttcgcagcacatggcgtggacttgcaagtgacgatggagttt
cccagcaatgaagtgatcaagcaggcagtattagcggatatgggtatctcattcttgtca
caccgtacgatggtgaaagaactgaaacacgggtatctgaaaacgctggatatagaaggt
gagccctatatcagtgaatggcaggttgcgcatcttaaaaccaagaaactgtctccggct
ctaacttgctttaagcagtttctcagtcagcaggggcagcaactactggacagtgacgac
cttgagctattagtcggtttaaaataa
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