Nitrincola iocasae: F5I99_10720
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Entry
F5I99_10720 CDS
T06212
Name
(GenBank) mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
nik
Nitrincola iocasae
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nik02000
]
F5I99_10720
Transporters [BR:
nik02000
]
Other transporters
Pores ion channels [TC:
1
]
F5I99_10720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
TetR_C_28
GLE1
DUF1180
Herpes_U5
Motif
Other DBs
NCBI-ProteinID:
QEW06944
UniProt:
A0A5J6LE35
LinkDB
All DBs
Position
2322330..2324606
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AA seq
758 aa
AA seq
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MQVFMLTTHSMLIRPFLAFFLLLIASFSSPSFAQEADKATDTQPSSALLADLLENPETRD
QLISELRALADPEKTQAAEEQQTSLVRQIADSTQAFAQQMTQQLLEALEVTSELANSDWH
LMVPYALNFLYVIIATLLSYLVLRKLAIPLFRYADNLVSTRPGAARLVTRLVIVLGALLV
DLLAILLAWVTGYSIALFLIGELGEMSTVQSLFLNAFLVIEVFKSLVRMFFSARYNGLRL
LPFCAETAAYWNAWIAKISSFIGYGMLLLVPVVNFYAAPALGHVVSLLVMLTAFVYALAI
ILQNKKRVAENISEQAENSDFAFTKIILNMLSRSWHLLAIAYFAGLLLVTAIRPEDALPV
ILQASMQTLLAIVVGLFISALLTQVISRQVQVPDDLKARFPALQARLNEFIPTSLKFVRL
IIMLVVFAFVLDAWSLFDFSAWLSSDTGSRLLGTVLSVAIILLIAKLTWIAFASWVEHRL
SPTGRSIASARQQTLLKLLSNAVMIMLIVFTVMISLAELGLNIGPLIAGAGVVGLAIGFG
AQTLVKDVITGIFIQLENAINTGDVVTADGITGTAENLTIRSLGLRDRFGTYHLIPFSSI
TTVSNYMRGYGYHVGDYGVAYREDTDDVTVHLRAAFDELMSDAEQSKDIMDELEVQGVSE
LADSAVNIRVRIKTLPGAQWSVGRAYNRLVKRHLDAASIEIPFPHFTLYFGQNKDGSAPP
APLNLVSTPASRNAEKSLEQQPDEARSNPQSGTDFDEA
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttttcatgctgacaacgcactctatgcttatacgcccctttttggcttttttt
ctgttgttaattgcaagcttctcttctccctcatttgctcaggaggccgataaagcgact
gacactcaaccttcaagcgcattactggccgacctgctggaaaacccggagacccgcgat
cagctcatcagtgaactgcgcgctctggccgacccggaaaaaactcaggcagctgaagaa
cagcagacatctctggttcgacagatagccgactcaactcaagcctttgcccagcaaatg
acacaacagctgttagaggcacttgaagtcaccagcgaactagcgaatagtgactggcac
ctgatggtgccctatgcccttaactttctttacgtcattattgccacgctgctcagttac
cttgttttgcgcaaactggctattccactgttccgctatgccgacaacctggtcagcaca
agacccggtgcagctcgactggtaacgcgtctggtgattgtactgggcgctctactggtg
gatttgctggctatcctgctggcttgggttactggctacagtatcgcccttttcctgatt
ggcgagttaggtgaaatgagtacggtacaatcactttttctgaatgccttcctcgtcatt
gaagtattcaagtctttggtaaggatgttcttttctgcacgctataacggtttgcgcctg
ctacccttctgcgctgagaccgctgcctactggaatgcctggatagccaaaatcagcagc
tttatcggttacgggatgctactattagtacccgtagtgaatttttacgcagcacccgca
ctggggcatgttgtcagcctgctggtcatgctgaccgctttcgtctatgccctggcgatc
attctgcagaacaaaaagcgcgtcgctgagaatatcagtgagcaggcagaaaattcggat
tttgcctttaccaaaattattttgaatatgctgtcacgcagctggcacctgctggctatt
gcctatttcgccgggttgttactggtcacagccatacgccccgaagatgctctaccggtc
attctgcaagccagtatgcaaaccctgctggctattgtagtgggtctgttcatctcggca
ctgctaacgcaggttatctcccgtcaggtacaggttcctgatgacttgaaagcccgcttc
ccggcattacaagcccgcttgaatgagttcattcccacctcgttgaaatttgtgcgtctg
atcatcatgctggtggtgtttgcctttgtactggatgcctggtcactgtttgactttagc
gcctggttgagctcggatactggtagtcgcttgctgggaaccgtgctgtcagtggccatc
atattactgatagcgaaattgacctggatcgcttttgccagttgggttgaacacaggttg
agcccaacgggccgcagtatcgccagtgcccgtcagcaaaccctgctaaaactgttaagc
aatgctgtaatgatcatgctgatcgtgtttacggtgatgatatccttggcagagctgggg
ctgaatatcggtccgctgattgccggtgccggcgtcgtaggcctggccataggttttgga
gcccagaccctggttaaggatgttatcactggcatctttattcagttggaaaatgccatt
aacaccggtgacgtagttaccgccgatggtattaccggtaccgctgaaaacctcaccatt
cgctcgctggggctacgtgaccgcttcggcacttaccacttgatccccttctcttccatt
accaccgtgtccaactatatgcgcggctatggttaccatgtcggtgattatggggtggcc
tatcgtgaagatactgatgacgtcacagtgcatctgcgtgcggcctttgatgaactgatg
agtgatgctgaacaaagcaaggatattatggatgaactggaagttcagggtgtctcggaa
ctggctgacagcgcggttaatattcgtgtacgtatcaaaaccctgcccggcgcgcaatgg
tcagtcggtcgtgcctataaccgactggtaaaacgtcatctggatgccgcgagtatagag
atacctttcccgcatttcaccctatatttcggccagaacaaggatggctccgcccccccg
gcaccactcaatctggtcagcaccccggcatcccgcaacgccgagaagagtctggagcag
caaccggatgaagcccgttcgaacccgcaaagcggcactgattttgatgaggcctag
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