Nitrincola iocasae: F5I99_12140
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Entry
F5I99_12140 CDS
T06212
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
nik
Nitrincola iocasae
Pathway
nik00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
F5I99_12140 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nik01007
]
F5I99_12140 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nik03016
]
F5I99_12140 (aspS)
03029 Mitochondrial biogenesis [BR:
nik03029
]
F5I99_12140 (aspS)
Enzymes [BR:
nik01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
F5I99_12140 (aspS)
Amino acid related enzymes [BR:
nik01007
]
Aminoacyl-tRNA synthetase
Class II (A)
F5I99_12140 (aspS)
Transfer RNA biogenesis [BR:
nik03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
F5I99_12140 (aspS)
Prokaryotic type
Other AARSs
F5I99_12140 (aspS)
Mitochondrial biogenesis [BR:
nik03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
F5I99_12140 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QEW07194
UniProt:
A0A5J6LEY2
LinkDB
All DBs
Position
complement(2622991..2624754)
Genome browser
AA seq
587 aa
AA seq
DB search
MRSHYCGDLRKEHIGQDITLSGWVHRRRDHGGVIFLDVRDREGITQVVFDPDREASFALA
DSVRNEYVIELKGLVRARPEGTENSEMPTGAIEVLGKELVILNKSDTPPFQLDDHQQVGE
DVRLRNRFIDLRRPEIQRKLRFRSKITHYIRNYLEENGFLDIETPILTRATPEGARDYLV
PSRTHEGHFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETSF
MDEEGIMGITEQMIRGLFLEQLNVDLGDFPRMPYSEAMQRYGSDKPDLRNPMELVDVADL
VAGVDFKVFAAPATDPKGRVAALKVPGGAELTRKLIDDYTKFVSIYGAKGLAWIKVNALE
NGAEGLQSPIVKFLGEDVALQIMQRVGAQNGDLVFFGADKAKVVNEALGALRIKVGEDLN
LLTQEWAPLWVVDFPMFEEDNNGGLTALHHPFTAPSCSPDELIEAPEGKLSRAYDMVLNG
TELGGGSVRIHDQVMQRAVFKVLGISDEEAEEKFGFLLNALRYGAPPHGGLAFGLDRLVM
LMTGSASIREVIAFPKTQSAACLLTDAPGEVSAAQLRELNIKLRKTP
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccattattgcggcgatcttcgtaaagaacatatcggccaggacattacactt
tcaggatgggttcaccgtcgtcgggatcatggtggcgttatctttctggatgtcagagat
cgtgaaggcatcacccaggtggtgtttgacccggatcgtgaagccagctttgccctggct
gacagtgttcgtaatgaatatgtgattgagttgaaaggactggttcgtgcccgccctgaa
ggtaccgaaaattcggagatgccaaccggtgcgattgaagtactgggcaaagaattagtg
attttgaacaagtcagatacgccacctttccagttggatgatcatcagcaggtgggcgaa
gatgtgcgtctgcgcaatcgctttattgatctgcgccgtccggagattcaacgtaaactg
cgtttccgttcaaaaattacccactatatccgtaactatctggaagaaaatggttttctg
gatattgaaacgccaattctgacgcgtgctacacccgaaggtgcgcgtgactatctggta
cctagccgtacccacgaagggcattttttcgcgctgccacagtcaccgcagttgttcaag
caactgctgatggtgtcagggtttgaccgttactatcagattgccaagtgctttcgtgat
gaagatctgcgtgctgatcgtcaaccggaattcactcagatcgatatagaaacctccttt
atggacgaagaaggtatcatggggattactgagcagatgatccgtggcctgttcctggaa
cagctgaatgtggatctgggagacttcccgcgcatgccttactcagaggcgatgcagcgc
tatggttccgataagccggatctgcgtaatccgatggaattggtcgatgtggctgatctg
gtggcgggtgttgacttcaaagtgtttgccgcaccagccactgaccctaaaggacgtgta
gccgccctgaaagtgccgggtggagccgaactgacgcgtaaactgattgatgactacact
aaatttgtatccatctacggtgctaaaggcctggcctggatcaaggttaatgcattggaa
aacggtgctgaagggctacaatcaccgattgtgaagttcctgggtgaagatgtagcactg
cagatcatgcagcgtgttggagcccagaacggcgatctggtgttctttggtgcggataag
gccaaggtagttaatgaagccttgggcgcgttgcgtattaaagtgggtgaagatctgaac
ctgctcacgcaggaatgggcaccactatgggtggtcgacttcccgatgtttgaagaagac
aataatggtggcctgaccgccttgcatcatccatttacggcacccagctgcagcccggat
gagctgattgaggctcctgagggtaagctgtcccgtgcttacgatatggtactgaatggt
actgaattgggtggtggttcggtgcgtattcatgatcaggtcatgcagcgggcggtattt
aaagtactcggcattagcgatgaagaagctgaagaaaaatttggcttcctgctcaacgcc
ctgcgatacggcgcgccgccacacggtggtttggcctttggtctggatcgtctggtgatg
ttgatgactgggtctgcctctattcgtgaggtgattgccttcccgaaaacacagagcgct
gcctgtctgttgaccgatgcgccgggtgaagtcagtgccgcacagttacgcgaactgaat
atcaagttgcgcaagacgccctga
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