Nitrincola iocasae: F5I99_12825
Help
Entry
F5I99_12825 CDS
T06212
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nik
Nitrincola iocasae
Pathway
nik03030
DNA replication
nik03430
Mismatch repair
nik03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F5I99_12825
03430 Mismatch repair
F5I99_12825
03440 Homologous recombination
F5I99_12825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nik03032
]
F5I99_12825
03400 DNA repair and recombination proteins [BR:
nik03400
]
F5I99_12825
Enzymes [BR:
nik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F5I99_12825
DNA replication proteins [BR:
nik03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F5I99_12825
DNA repair and recombination proteins [BR:
nik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F5I99_12825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_16
AAA_5
AAA_22
RuvB_N
AAA_2
ResIII
TniB
AAA_18
AAA_30
AAA_14
AAA_19
PIF1
AAA_assoc_2
AAA_7
TsaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QEW07312
UniProt:
A0A5J6LG34
LinkDB
All DBs
Position
complement(2775455..2777326)
Genome browser
AA seq
623 aa
AA seq
DB search
MSYQVLARKWRPRKFSEMAGQEHVLRALVNALDNDRLHHAYLFTGTRGVGKTSIARLFAK
ALNCEEGVSSTPCGVCTACREIAEGRFVDLIEVDAASRTKVEDTRELLENVQYAPSHGRY
KVYLIDEVHMLSSSSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFNLKNLSP
QRIVEHLHYVLTEEQLSFDEPALWLLARSADGSMRDALSLTDQAIAFGSGMVSEADVRTM
LGTIDQRLVYQIMIALAQHDARGVMDAVQALSEFSPDYSSVLADLVSLLHRVALAQLLPD
AIDNSLGDQQQVMELAALLRAEDIQLYYQIALMGRKDLPYAPDLREGLEMVLLRMLAFRP
ASLQVSTPAAEKPTTVTERPAGIDSTSNSPVETAATVTARSNQAEVVPPWDEAPPWTDDE
VPSPVKKPEAAETPAAQYAEPAPEAAELVPPVVTPSLSSREMSAVSPEVVVDTPLVVPSA
VVDEASEAVVPVSLTELTLTDWVRVAPLLALTGMTASICRNLSLESVDAETLSFHYPPEQ
GALLNSIQKERIQEALQVYFNASLEIRFVQAEQTHETPAQYSNRKKAERQAEAVISMQKD
PMVQRIIEQFSAELDTASVRPID
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtactcgcgcgaaaatggcgaccgcgaaaattcagtgaaatggctggg
caggagcatgtgttacgtgctctggtgaatgcactagataatgatagattgcatcatgcc
tatctgtttaccgggacacgtggggtaggtaagacctccattgcccgcttgtttgccaag
gcattgaactgtgaggaaggggtttcctctacaccctgcggtgtgtgtacggcttgtcgt
gagattgccgaaggtcggtttgtcgacctgattgaggtggatgcggcatcccgtaccaag
gtagaggatacccgagagttgctggaaaatgtgcaatatgcacccagccacgggcgctat
aaagtgtacctgatcgatgaggtacacatgctctccagcagttcattcaatgcactgttg
aaaaccctcgaagaaccgcctccgcatgttaaatttctgttagcgaccaccgatccgcaa
aaattgccggtaacggtactgtctcgctgcttacagtttaatctgaagaatcttagtcct
cagcgcattgttgagcatctgcactatgttctcactgaagagcaactgagttttgatgag
ccagcgctttggttgctggcgcgcagtgccgatggttccatgcgtgatgccttgagcttg
actgaccaggcgattgcctttggttcaggtatggtttctgaggctgatgtgcgcaccatg
ttaggtaccatagaccagcggctggtgtatcagattatgatcgcgttggcgcaacatgat
gcccgtggtgttatggatgcggtacaagcactttccgaatttagcccggattacagctca
gttttagcggacctggtcagtctgctgcatcgtgtggccctggctcaattacttcccgat
gccatcgacaacagcctgggagatcagcagcaggttatggagctcgccgcgttgctgcgt
gcggaagatatccagctgtattatcagattgccctgatggggcgcaaagatctgccctat
gcgccggatctgcgagaagggctggaaatggtgttgttgcgcatgctggcgtttcgtccg
gcttctttgcaggtatcaacgcctgcagctgaaaaacccacaacagtgacagagaggcct
gctggtattgattcaacgagcaattcgcccgttgagacggctgcaactgtaacggcccga
tcaaatcaggctgaagtggtacccccctgggatgaagcacctccctggacggatgatgag
gttccttccccggtaaaaaagcctgaggctgctgagactccggcagcccaatacgctgag
cctgccccagaagctgcagagctggtgccgccggttgtcacaccttcattatccagtagg
gaaatgtctgctgtatcacctgaggttgtcgttgacacgcctttggtcgtgccttcggcc
gttgtagatgaggcatctgaagcggttgtgccagtgagcctaacggagctgaccttgaca
gattgggtccgagttgcgccacttttggcgctgacgggtatgactgcgagtatatgccgt
aatttgtcactggaaagcgttgatgctgagacattaagctttcattatccacctgagcag
ggcgcgttgctgaatagcatccaaaaagagcgtattcaggaagcgttacaggtgtatttt
aacgcgtcgcttgaaatacgctttgttcaagcggaacaaacccacgaaacaccagcccaa
tacagtaatcgtaaaaaagcggaacgccaggctgaagcggtgatttctatgcagaaggac
ccgatggttcagcgtataattgaacagttctctgccgagctggacacagcttctgtcaga
cccattgattag
DBGET
integrated database retrieval system
