Nitrincola iocasae: F5I99_13010
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Entry
F5I99_13010 CDS
T06212
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nik
Nitrincola iocasae
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nik03400
]
F5I99_13010
DNA repair and recombination proteins [BR:
nik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F5I99_13010
Archaeal homologous recombinant proteins
F5I99_13010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
cobW
ABC_tran
nSTAND3
TsaE
MobB
AAA_28
MeaB
GTP_EFTU
AAA_25
DUF87
Motif
Other DBs
NCBI-ProteinID:
QEW07345
UniProt:
A0A5J6LFN3
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All DBs
Position
complement(2823253..2825886)
Genome browser
AA seq
877 aa
AA seq
DB search
MRILSLRLKNLNSLKGEFLIDFRQPPFTETSLFAITGATGAGKTTLLDALCLALYHQTPR
MKVISAASNELMTRHTAEALAEVEFEVKGVGYRAFWSQRRAREQADGKLQAPKVELAELH
SGKLLSTRIQEKLQLTETLTGLDFERFTRSMLLAQGGFAAFLNAGANERAELLEELTGTE
IYGRLSAAVFEHTRIEKQQLDLLQSQASGVMLLSDEQLEALQASRLQLQQQEQTLIPRQR
QLQTALQLMRQVHDTQQRLAQLDQTRTTLQQGWQQQVHQGTLQLLLAQRVLEQETLWHQQ
QHEALEKAQTDLQREQQQCQTDIRELLAEQTEAQLQQQQNDLTKRQGHLDALLDLEKVSQ
RQAVQMTQLVELSEAKTTGLTELTQQRQPLRDTYTHIRDQVKDKEVLLRQEERIKQLEAH
RQALQANEPCPLCGSREHPAIEAYQALDVSATEAALQSLRDQLELVREQGSQLTAEIAKV
QAEADGLTRQIEALKTEQGNTASRLQHFYQILVLEPQQEATKTLSTQLMSEQQSLQQRLD
SLNKLKQQQHAIEQQLTRQQQQQQAQYQADETRRQQAQQLQDLQQRFEALAGADNPAVSD
PEVRADQSLTQCLAAIRSRLSQLEQQRSDLHQLEGQSLSLQESLKTALAQQSETQPEAVL
QTEADQLADTLRQTSMQLGQLQQQLKQDHQLRETLGALQLKIDQQQQQCDRWQQLNHLIG
AKDGAKYRRFAQGLTLDHLISLANTQLERLHNRFQLARREAAELEIEVIDTWQADARRDT
RTLSGGESFLVSLALALGLSDLVSHKTSIDSLFLDEGFGTLDAETLEVALDALDNLNASG
KTIGIISHVEALKERIPVQIRVSKQQGLGNSRLQVTG
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcctcagtttacgcttaaaaaatttaaactcgcttaaaggtgagtttttgatc
gattttcgccaacccccgtttaccgagaccagcctgtttgcgatcaccggtgcaaccggt
gctggcaaaaccacgctgctcgatgcgctgtgtctggcgctctatcaccagaccccgcgg
atgaaagtcatttcagccgcctctaatgagctgatgacccgacataccgccgaagcgctg
gctgaagtggaatttgaagtcaaaggtgtaggctatcgggcgttttggagccagcgccgc
gccagagaacaggccgatggtaagctccaggctcccaaagtcgagttggctgaactgcac
agcggtaagctgttgtcgacccggatacaggaaaaactgcaactgacggaaaccctgacc
gggttggatttcgagcgctttacccgctccatgctgctggcgcaggggggatttgcagct
tttctcaatgccggagccaatgagcgagccgaactgctggaagaacttaccggtaccgaa
atttacgggcgcttgtcagccgccgtgtttgagcatacccgcattgaaaagcagcaactg
gatttactgcaaagccaggcaagtggggtgatgttactgtccgatgagcaattggaagcc
ctgcaggcctcccgtttgcaactgcagcagcaggagcagacgctaattcctcggcagcgt
cagttacagactgcgctgcagttgatgcgtcaggtgcatgacacgcagcagcgacttgcg
cagcttgatcagacgcgtaccaccctgcagcagggctggcagcagcaggtgcatcaaggg
accctgcagctattgctggctcagcgagtgctggagcaagagacgctatggcatcagcaa
caacatgaggctctggaaaaagcacagacagacttgcagcgggagcagcaacagtgccaa
accgacatccgtgagctattggctgagcagacagaagcacagctgcaacaacagcagaac
gacctgaccaagcgtcaggggcacctggatgccttgctcgaccttgaaaaagtcagtcag
cggcaagcggtgcaaatgacacagctggttgagttatcagaggccaagactaccgggctg
accgagttgacccagcaacgccaaccactgagagacacctacacacatatacgtgatcaa
gttaaagacaaggaagttctgctgcgtcaggaagagcgcattaagcaactggaagcccat
cggcaggccttgcaagcgaatgagccttgtcccctctgtggctcccgggaacacccggcc
attgaagcctatcaagcgctggatgtgtcagccactgaagcggcgttgcagtcactgcgt
gatcaactagagctggtcagagaacagggcagccagctcaccgccgagatagccaaagtc
caggctgaagccgacggtttgacccggcagatcgaggcactgaaaactgagcagggtaat
accgcatcacgcttgcagcacttttatcaaatactggtattagaacctcagcaagaggcc
accaaaaccctgtcgacgcagttgatgtctgaacagcaaagcctgcagcaacgtctggat
agcctgaacaagcttaaacagcaacagcacgccattgagcagcagcttaccaggcaacag
cagcaacagcaggcacagtatcaggcggatgaaacccgccgacaacaggcgcagcaattg
caggatctgcaacagcgttttgaggctttggcaggggctgataaccctgctgtcagtgac
cctgaggtcagggctgatcagtcgctgacgcagtgcctggccgctatccgcagccgcctg
tcgcaactggagcaacagcgcagtgacctgcaccagttagaagggcagtctctgtcgctg
caggaatctctgaaaacagcattggcccagcagtcggaaacccagcctgaggctgtgtta
cagactgaggctgatcaactggccgataccctgcgacagacttccatgcagttggggcag
ttgcagcagcagttaaagcaggatcatcagctcagggaaacgcttggcgcgttgcagctg
aaaatagaccagcagcaacagcagtgtgatcgctggcaacagcttaaccatcttattggc
gctaaagatggcgctaaataccgtcgctttgcccagggactgacgctggatcatctgatc
agcttggccaatacgcagttggagcgtctgcataaccgttttcaactggctcgccgggaa
gcagctgagctggaaattgaagtgatcgatacctggcaggccgatgcccgccgggatacg
cgaaccctgtccggtggcgagagttttctggtcagtttagcgctggcgctgggactgtct
gatctggttagtcataaaaccagtatcgattcgctgtttctggatgaaggttttggcacc
ctggatgcagaaaccctggaagtagcactggatgcgctggataacctcaatgccagtggc
aagaccattggtatcatcagccatgtcgaggctttaaaggagcgtataccggtgcagatc
cgtgtaagcaaacagcaggggctgggcaatagccgtctacaagtgacggggtga
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