Nitrincola iocasae: F5I99_13645
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Entry
F5I99_13645 CDS
T06212
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nik
Nitrincola iocasae
Pathway
nik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F5I99_13645 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nik03019
]
F5I99_13645 (groL)
03110 Chaperones and folding catalysts [BR:
nik03110
]
F5I99_13645 (groL)
03029 Mitochondrial biogenesis [BR:
nik03029
]
F5I99_13645 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nik04147
]
F5I99_13645 (groL)
Enzymes [BR:
nik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
F5I99_13645 (groL)
Messenger RNA biogenesis [BR:
nik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
F5I99_13645 (groL)
Chaperones and folding catalysts [BR:
nik03110
]
Heat shock proteins
HSP60 / Chaperonin
F5I99_13645 (groL)
Mitochondrial biogenesis [BR:
nik03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
F5I99_13645 (groL)
Exosome [BR:
nik04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
F5I99_13645 (groL)
Exosomal proteins of other body fluids (saliva and urine)
F5I99_13645 (groL)
Exosomal proteins of breast cancer cells
F5I99_13645 (groL)
Exosomal proteins of colorectal cancer cells
F5I99_13645 (groL)
Exosomal proteins of bladder cancer cells
F5I99_13645 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF2209
REF
MGAT2
Motif
Other DBs
NCBI-ProteinID:
QEW07452
UniProt:
A0A5J6LGG7
LinkDB
All DBs
Position
complement(2979334..2980977)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVRFGNDARQRMLEGVNILADAVKTTLGPKGRNVVLERSFGSPVITKDGVSVAKEI
ELKDKFENMGAQMVKEVASKANDVAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGI
DKAAAAVVAELAKMSVPCTDYKAIAQVGTISANSDSEIGRIIAEAMEKVGQEGVITVEEG
SGFDNELDVVEGMQFDRGYLSPYFINNQENMSAELEDPYILLVDKKISNIRELLPVLEQV
AKSSRPLLIISEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGQV
ISEEVGLNLEQAGLEHLGQAKRVNITKENTTIVDGAGSQADIEARVQQVRVQIEDTSSDY
DREKLQERVAKLAGGVAVIKVGGGTEVEMKEKKARVDDALHATRAAVEEGVVPGGGVALI
RALDNVGKLLGDNHDQNIGIELAFRALEAPLRQIVANAGGEGSVVVSKIREGKGSFGFNA
ANDQYGDMMEMGIIDPAKVTRAALQAAASIAGMMITTEAMIADLPEDKPAMPDMGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtacgttttggtaatgatgcccgtcagcgcatgctggaaggggtt
aatattctggctgatgccgtaaagacaaccctgggcccgaaaggccgtaatgtggtgttg
gaaagatctttcggctcaccggtcatcaccaaagatggtgtatctgttgccaaagaaatc
gaactaaaagacaagttcgaaaatatgggcgcacagatggtcaaggaagtcgcttccaag
gctaatgatgtagcgggtgacggtactactacggctactgtcctggctcaggcaatcgtt
aatgaaggcctgaaatctgttgcggctggcatgaatccgatggacctgaaacgtggtatc
gataaagccgcagcggctgttgtggctgagctggctaagatgtctgtaccttgtactgac
tacaaagcgattgctcaggttggtacgatttctgccaactctgattccgaaatcggtcgt
atcatcgctgaagcgatggaaaaagtcggtcaggaaggcgttatcacggttgaagaaggt
tccggtttcgacaacgaactggatgtggttgaaggtatgcagtttgatcgtggctacctg
tctccttacttcatcaataatcaggaaaacatgtcagctgaactggaagatccttacatc
ctgctggttgacaagaaaatctccaatatccgtgagttactgccagtactggagcaggtt
gccaagtcttcccgtccgctgctgatcatctctgaagacgttgaaggcgaagccctggcg
acactggttgttaacaacatgcgtggcatcgttaaagtcgccgcggttaaagcacctggt
ttcggtgatcgtcgcaaagccatgctgcaggatatcgctgttctgaccggtggtcaggtt
atctctgaagaagtgggtctgaacctggagcaggcgggtctggaacacctgggtcaggct
aagcgtgtcaatatcactaaagagaacaccactattgttgatggtgccggttcgcaggcc
gatatcgaagcgcgtgttcagcaggtacgtgtgcagatcgaagatacctcttctgattat
gatcgtgaaaaactgcaggagcgcgtggctaaactggccggtggcgttgctgtcatcaaa
gtcggtggcggtactgaagttgaaatgaaagagaaaaaagcccgcgttgacgacgccctg
catgcaacccgtgcagccgttgaagaaggtgtggttcctggcggtggtgttgcgttgatt
cgtgcactggataacgtcggtaaactgctgggtgataaccacgatcagaatatcggtatc
gagttggccttccgcgctctcgaagcaccgttgcgtcagattgttgccaacgctggtggt
gaaggttctgttgtggtttccaaaattcgcgaaggtaagggttcgttcggctttaatgcc
gccaatgaccagtacggcgatatgatggaaatgggtattatcgatccagctaaagtgacc
cgtgcagcattgcaggcggcggcatccattgctggcatgatgattaccactgaagccatg
attgctgatttgccggaagacaagcctgctatgcctgatatgggcggcatgggtggtatg
ggtggtatgggcggaatgatgtga
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