Nitrincola iocasae: F5I99_15835
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Entry
F5I99_15835 CDS
T06212
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
nik
Nitrincola iocasae
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nik03000
]
F5I99_15835
Transcription factors [BR:
nik03000
]
Prokaryotic type
Helix-turn-helix
AraC family
F5I99_15835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QEW07845
UniProt:
A0A5J6LH34
LinkDB
All DBs
Position
3436462..3437382
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AA seq
306 aa
AA seq
DB search
MVSTSTELVQGCGYTRHIPGELLLSSSGLCLDGCFIGWHTQSNQPIESDRPATTEHQFVL
YESAEEQGEYQYNHGLWRKYTKRTNDWYIAPANENSINWRSVTTHATNTPSIFRIHITPK
KLHANALDVFSINTSSIALDHRMNIQDSFMAGLAGELKSELKNPCNSSHLYIEQLIETFS
AYILKRYCKFNTEAINRLPMLSLKRKHDLIDYIHDNIGNELALAELADLACLSKYHFARA
FKETFRITPHSYVLKCRIEHASSLLKNTDLPISIIAEQCGFSSASRFSKVFSNLQGISPN
QYRLKD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaaccagcaccgaattagtacaaggatgcggatacacccgccatattccagga
gaactactgctaagctccagtggtttgtgtctggacggttgttttattggttggcataca
caatctaatcagcctattgagagtgaccggcccgctaccacagaacatcagtttgtatta
tatgaatctgcagaagaacaaggtgaatatcagtataatcacggcttatggagaaaatac
accaagcgaaccaatgattggtatatcgcgcccgccaatgaaaacagtatcaactggcgc
tcagttactacacatgctactaataccccatcgatttttcgaatccatataacgccaaaa
aaattacacgctaatgccctggatgtcttttctattaacacttcatccatagcattagat
catagaatgaatattcaggattcatttatggctggattagccggtgaacttaagagtgaa
ttaaaaaatccctgtaattcatcgcacttgtatatagagcaattaatcgaaaccttctct
gcatacattctaaaacgttattgtaaattcaatactgaagctataaatcgattgccgatg
ttgagcttgaaacgcaagcacgacctgattgactatatacatgataatattggtaacgaa
cttgcactggcagagctcgcagacttggcctgcttgagcaagtatcatttcgccagggca
ttcaaggagaccttccgaatcacgcctcatagctatgtattaaaatgcaggatagaacac
gcctccagtcttctgaaaaacactgatcttcctatctccatcattgctgagcagtgtgga
tttagcagtgcatcccgattttcaaaggtgttttctaacctgcaagggataagcccaaat
caatatcggctaaaggattaa
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