Nitrincola iocasae: F5I99_15940
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Entry
F5I99_15940 CDS
T06212
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
nik
Nitrincola iocasae
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nik03036
]
F5I99_15940 (xerD)
Chromosome and associated proteins [BR:
nik03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
F5I99_15940 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QEW08651
UniProt:
A0A5J6LL51
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All DBs
Position
complement(3457394..3458296)
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AA seq
300 aa
AA seq
DB search
MEPQPQDQHLIREYVQLAWLEKGLSRNTQLSYQRDLKHFALWLNDRSLYLLQVQRHHLQA
YLDWRVGQAFKAVSTARVLSCLRGFYRFLLREGRVEQDPTLNIASPKPGRPLPKTLTETD
VECLLAAPDVTDVLGLRDRTMLELIYASGLRVTELVGLRTEQMNLRQGVIRVVGKGDKER
LVPVGDEALEWMRRYLKTSRPLLAVDTSQDVVFLSRRGNQMTRQTFWHRVRLHAGQAGID
KALSPHVLRHAFATHLLNHGADLRVVQMLLGHADLSTTQIYTHVATHRLQSLHRAHHPRG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttggaaccccagcctcaggatcagcatcttattcgtgagtatgtgcagttagcctggttg
gaaaagggcttgagtcgtaatacacagctatcctatcagcgcgatctcaagcactttgcc
ctatggcttaatgatcgttctctctatttactgcaggttcagcggcatcaccttcaggct
tacctggactggcgtgttgggcaggcgttcaaagcggtttccacagcaagggtgttgtcc
tgtctgcgtggtttttaccgttttctgctgcgagaggggcgggtagagcaggatccaaca
ctcaatattgccagtcctaaaccgggacgccctttacctaagaccttgactgaaaccgat
gttgaatgtctacttgccgcacctgatgtgacggatgtgctggggctgcgtgacagaacc
atgctggaactgatttatgcttctggtttgcgggtcacagagttagtgggtttgcgcaca
gagcagatgaatctgcgtcagggggtgatccgggttgtcggtaagggagataaggagcgc
ctggtgccagttggggatgaggcgttggagtggatgcgccgctacttgaaaacgtccagg
cccttgcttgccgttgacacctcgcaggatgtggttttcctgagtcgtcggggcaatcag
atgacacgtcagacgttctggcaccgagtgcgcttgcatgcggggcaggcaggcatcgat
aaagccttgtcgccacacgtgctgcgccatgcctttgcaacccatttgctcaatcatggg
gctgacctgcgtgttgtgcagatgctactcggtcatgccgatctgtcaacaacacaaatt
tatacacacgtagcaacacacagattacagtcactgcatcgggcacatcatccgcgggga
tga
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